RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 PCDH19Q8TAB3 1148 aa20.58■□□□□ 0.89
SNHG6-203ENST00000520944 SPOCK2Q92563 424 aa20.58■□□□□ 0.89
SNHG6-203ENST00000520944 FUBP1Q96AE4 644 aaKnown RBP20.58■□□□□ 0.89
SNHG6-203ENST00000520944 NSMCE3Q96MG7 304 aa20.58■□□□□ 0.89
SNHG6-203ENST00000520944 ZNF578Q96N58 590 aaPredicted RBP20.58■□□□□ 0.89
SNHG6-203ENST00000520944 CCDC3Q9BQI4 270 aa20.58■□□□□ 0.89
SNHG6-203ENST00000520944 XPO4Q9C0E2 1151 aaKnown RBP20.58■□□□□ 0.89
SNHG6-203ENST00000520944 POLR1BQ9H9Y6 1135 aa20.58■□□□□ 0.89
SNHG6-203ENST00000520944 KCTD5Q9NXV2 234 aa20.58■□□□□ 0.89
SNHG6-203ENST00000520944 PHTF1Q9UMS5 762 aa20.58■□□□□ 0.89
SNHG6-203ENST00000520944 DGKBQ9Y6T7 804 aa20.58■□□□□ 0.89
SNHG6-203ENST00000520944 CBFA2T2O43439 604 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 H2AFZP0C0S5 128 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 CYP2A6P11509 494 aaPredicted RBP20.57■□□□□ 0.88
SNHG6-203ENST00000520944 KRT10P13645 584 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 IL4RP24394 825 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 ITPKBP27987 946 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 VIPR1P32241 457 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 GJC1P36383 396 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 TRIM23P36406 574 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 MAXP61244 160 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 ITKQ08881 620 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 MMRN1Q13201 1228 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 TSR1Q2NL82 804 aaKnown RBP20.57■□□□□ 0.88
SNHG6-203ENST00000520944 SKOR2Q2VWA4 1001 aaPredicted RBP20.57■□□□□ 0.88
SNHG6-203ENST00000520944 DENND2CQ68D51 928 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 PNCKQ6P2M8 343 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 H2AFVQ71UI9 128 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 MAP7D3Q8IWC1 876 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 NDUFAF2Q8N183 169 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 CTNNBL1Q8WYA6 563 aaPredicted RBP20.57■□□□□ 0.88
SNHG6-203ENST00000520944 RBM15Q96T37 977 aaKnown RBP eCLIP20.57■□□□□ 0.88
SNHG6-203ENST00000520944 DEF6Q9H4E7 631 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 WDR26Q9H7D7 661 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 SYNDIG1Q9H7V2 258 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 HAUS2Q9NVX0 235 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 ZNHIT6Q9NWK9 470 aaKnown RBP20.57■□□□□ 0.88
SNHG6-203ENST00000520944 UVRAGQ9P2Y5 699 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 LCMT1Q9UIC8 334 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 MOSPD1Q9UJG1 213 aa20.57■□□□□ 0.88
SNHG6-203ENST00000520944 TMEM202A6NGA9 273 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 TNFRSF10CO14798 259 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 CD48P09326 243 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 HNRNPH3P31942 346 aaKnown RBP20.56■□□□□ 0.88
SNHG6-203ENST00000520944 SPIDRQ14159 915 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 PDK2Q15119 407 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 ARMC12Q5T9G4 340 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 OR6C4Q8NGE1 309 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 OR8K1Q8NGG5 319 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 FAM71BQ8TC56 605 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 NUS1Q96E22 293 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 PDXPQ96GD0 296 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 COQ10AQ96MF6 247 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 NT5MQ9NPB1 228 aa20.56■□□□□ 0.88
SNHG6-203ENST00000520944 MYLKQ15746 1914 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 PROSCO94903 275 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 KRT7P08729 469 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 HOXB3P14651 431 aaPredicted RBP20.55■□□□□ 0.88
SNHG6-203ENST00000520944 RBMS1P29558 406 aaKnown RBP20.55■□□□□ 0.88
SNHG6-203ENST00000520944 PCBP4P57723 403 aaKnown RBP20.55■□□□□ 0.88
SNHG6-203ENST00000520944 ERVPABLB-1P60509 514 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 CCDC173Q0VFZ6 552 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 TRAF2Q12933 501 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 TRIM14Q14142 442 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 ARHGEF7Q14155 803 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 DPYSL3Q14195 570 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 CNGA3Q16281 694 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 SLC18A3Q16572 532 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 ZFYVE27Q5T4F4 411 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 SPECC1LQ69YQ0 1117 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 TIGD7Q6NT04 549 aaPredicted RBP20.55■□□□□ 0.88
SNHG6-203ENST00000520944 USP45Q70EL2 814 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 TAF8Q7Z7C8 310 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 KYQ8NBH2 561 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 ZNF248Q8NDW4 579 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 OR1E3Q8WZA6 343 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 SCRN2Q96FV2 425 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 ATXN7L3BQ96GX2 97 aa20.55■□□□□ 0.88
SNHG6-203ENST00000520944 POLR1EQ9GZS1 481 aaKnown RBP20.55■□□□□ 0.88
SNHG6-203ENST00000520944 DXOO77932 396 aaKnown RBP20.54■□□□□ 0.88
SNHG6-203ENST00000520944 HEXIM1O94992 359 aaKnown RBP20.54■□□□□ 0.88
SNHG6-203ENST00000520944 PGLSO95336 258 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 TPM1P09493 284 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 GM2AP17900 193 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 CES1P23141 567 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 GARSP41250 739 aaKnown RBP20.54■□□□□ 0.88
SNHG6-203ENST00000520944 ARSEP51690 589 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 PAFAH1B3Q15102 231 aaKnown RBP20.54■□□□□ 0.88
SNHG6-203ENST00000520944 ATP13A4Q4VNC1 1196 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 ANKRD20A8PQ5CZ79 823 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 C3orf38Q5JPI3 329 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 NYAP1Q6ZVC0 841 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 TEX26Q8N6G2 289 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 FAM46DQ8NEK8 389 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 CRELD1Q96HD1 420 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 LGMNQ99538 433 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 SEMA3CQ99985 751 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 ZNF670Q9BS34 389 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 LGR4Q9BXB1 951 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 CYP4F12Q9HCS2 524 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms