RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 OLIG2Q13516 323 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 SEPT6Q14141 434 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 USP39Q53GS9 565 aaKnown RBP14.18□□□□□ -0.14
SDC2-203ENST00000519587 LRRC73Q5JTD7 316 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 DENND5AQ6IQ26 1287 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 CENPUQ71F23 418 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 ZNF534Q76KX8 674 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 NLRP9Q7RTR0 991 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 GPR161Q8N6U8 529 aaKnown RBP14.18□□□□□ -0.14
SDC2-203ENST00000519587 OR14C36Q8NHC7 312 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 FBXO25Q8TCJ0 367 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 CXorf40AQ8TE69 158 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 PTCD2Q8WV60 388 aaKnown RBP14.18□□□□□ -0.14
SDC2-203ENST00000519587 FAM131CQ96AQ9 280 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 FMO2Q99518 471 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 FAM126AQ9BYI3 521 aaPredicted RBP14.18□□□□□ -0.14
SDC2-203ENST00000519587 TPSD1Q9BZJ3 242 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 GPR63Q9BZJ6 419 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 B4GALT6Q9UBX8 382 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 SERGEFQ9UGK8 458 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 CYP8B1Q9UNU6 501 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 FADS3Q9Y5Q0 445 aa14.18□□□□□ -0.14
SDC2-203ENST00000519587 SCN8AQ9UQD0 1980 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 SDR42E2A6NKP2 422 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 C2orf81A6NN90 581 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 PROB1E7EW31 1015 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 PSMD11O00231 422 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 PLK4O00444 970 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 EIF3HO15372 352 aaKnown RBP eCLIP14.17□□□□□ -0.142e-19■■□□□ 13
SDC2-203ENST00000519587 PCDH8O95206 1070 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 SEMA4FO95754 770 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 SLC4A1P02730 911 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 ALPIP09923 528 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 PIRTP0C851 137 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 HNF1BP35680 557 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 GRIA1P42261 906 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 MAGEA3P43357 314 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 POU6F1Q14863 301 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 TAF1AQ15573 450 aaPredicted RBP14.17□□□□□ -0.14
SDC2-203ENST00000519587 TMEM52BQ4KMG9 183 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 KIAA1161Q6NSJ0 714 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 NEK5Q6P3R8 708 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 CASC4Q6P4E1 433 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 ASCL5Q7RTU5 278 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 FAM124AQ86V42 546 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 CAND1Q86VP6 1230 aaKnown RBP14.17□□□□□ -0.14
SDC2-203ENST00000519587 OR2T34Q8NGX1 318 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 BRSK1Q8TDC3 778 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.17□□□□□ -0.146e-6■□□□□ 8.8
SDC2-203ENST00000519587 LRRC39Q96DD0 335 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 RANBP9Q96S59 729 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 HINFPQ9BQA5 517 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 NAT9Q9BTE0 207 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 PCED1AQ9H1Q7 454 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 NEUROG2Q9H2A3 272 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 ZFYVE1Q9HBF4 777 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 RAD18Q9NS91 495 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.17□□□□□ -0.14
SDC2-203ENST00000519587 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.17□□□□□ -0.145e-18■□□□□ 8.1
SDC2-203ENST00000519587 PKP3Q9Y446 797 aa14.17□□□□□ -0.14
SDC2-203ENST00000519587 V9GYY5 206 aaPredicted RBP14.17□□□□□ -0.14
SDC2-203ENST00000519587 NDUFS2O75306 463 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 PRKCGP05129 697 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 ADRA1DP25100 572 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 MGAT1P26572 445 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 CD6P30203 668 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 PXNP49023 591 aaPredicted RBP14.16□□□□□ -0.14
SDC2-203ENST00000519587 CSTF1Q05048 431 aaKnown RBP14.16□□□□□ -0.14
SDC2-203ENST00000519587 ERCC6LQ2NKX8 1250 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 BBS9Q3SYG4 887 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 LRRC66Q68CR7 880 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 ZDHHC24Q6UX98 284 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 SLC36A4Q6YBV0 504 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 LYSMD3Q7Z3D4 306 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 C11orf74Q86VG3 221 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 WDR5BQ86VZ2 330 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 LONP2Q86WA8 852 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 CCDC25Q86WR0 208 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 CCNJLQ8IV13 435 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 RAVER1Q8IY67 606 aaKnown RBP14.16□□□□□ -0.14
SDC2-203ENST00000519587 C1QTNF7Q9BXJ2 289 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 ANKZF1Q9H8Y5 726 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 ZDHHC18Q9NUE0 388 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 PIH1D1Q9NWS0 290 aaKnown RBP14.16□□□□□ -0.14
SDC2-203ENST00000519587 KCTD5Q9NXV2 234 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 PKD2L2Q9NZM6 624 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 ITM2BQ9Y287 266 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 TCAF1Q9Y4C2 921 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 SPO11Q9Y5K1 396 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 MAD1L1Q9Y6D9 718 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 ZNF106Q9H2Y7 1883 aaKnown RBP14.16□□□□□ -0.14
SDC2-203ENST00000519587 EML5Q05BV3 1969 aa14.16□□□□□ -0.14
SDC2-203ENST00000519587 LRRK1Q38SD2 2015 aa14.15□□□□□ -0.14
SDC2-203ENST00000519587 TRPM6Q9BX84 2022 aa14.15□□□□□ -0.14
SDC2-203ENST00000519587 TBC1D3DA0A087WVF3 549 aa14.15□□□□□ -0.14
SDC2-203ENST00000519587 TBC1D3IA0A087WXS9 549 aa14.15□□□□□ -0.14
SDC2-203ENST00000519587 TBC1D3EA0A087X179 549 aa14.15□□□□□ -0.14
SDC2-203ENST00000519587 TBC1D3KA0A087X1G2 549 aa14.15□□□□□ -0.14
SDC2-203ENST00000519587 IGHV1OR15-9A0A0B4J2B8 117 aa14.15□□□□□ -0.14
SDC2-203ENST00000519587 MAGEB16A2A368 324 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms