RNA–Protein interactions for RNA: ENST00000519529.1

CHMP7-206, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 690 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-206ENST00000519529 SYNDIG1Q9H7V2 258 aa20.14■□□□□ 0.81
CHMP7-206ENST00000519529 NT5MQ9NPB1 228 aa20.14■□□□□ 0.81
CHMP7-206ENST00000519529 PADI4Q9UM07 663 aa20.14■□□□□ 0.81
CHMP7-206ENST00000519529 PTPRQQ9UMZ3 2332 aa20.14■□□□□ 0.81
CHMP7-206ENST00000519529 BPTFQ12830 3046 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 HTRA2O43464 458 aaPredicted RBP20.13■□□□□ 0.81
CHMP7-206ENST00000519529 HOXB3P14651 431 aaPredicted RBP20.13■□□□□ 0.81
CHMP7-206ENST00000519529 IL4RP24394 825 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 NFKBIAP25963 317 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 ITPKBP27987 946 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 GABREP78334 506 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 ITKQ08881 620 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 TRAF2Q12933 501 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 ISXQ2M1V0 245 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 CPNE8Q86YQ8 564 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 KCTD6Q8NC69 237 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 OR56A4Q8NGH8 313 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 TPCN2Q8NHX9 752 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 CTNNBL1Q8WYA6 563 aaPredicted RBP20.13■□□□□ 0.81
CHMP7-206ENST00000519529 PACSIN1Q9BY11 444 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 DEF6Q9H4E7 631 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 MOSPD1Q9UJG1 213 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 PHTF1Q9UMS5 762 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 GPR34Q9UPC5 381 aa20.13■□□□□ 0.81
CHMP7-206ENST00000519529 ZFC3H1O60293 1989 aaKnown RBP20.12■□□□□ 0.81
CHMP7-206ENST00000519529 TMEM202A6NGA9 273 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 MFSD11O43934 449 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 H2AFZP0C0S5 128 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 GM2AP17900 193 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 KELP23276 732 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 HNRNPH3P31942 346 aaKnown RBP20.12■□□□□ 0.81
CHMP7-206ENST00000519529 VIPR1P32241 457 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 KIAA1024LP59773 190 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 DPYSL3Q14195 570 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 CNGA3Q16281 694 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 SKOR2Q2VWA4 1001 aaPredicted RBP20.12■□□□□ 0.81
CHMP7-206ENST00000519529 TBC1D25Q3MII6 688 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 ZFYVE27Q5T4F4 411 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 KCTD16Q68DU8 428 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 LVRNQ6Q4G3 990 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 RBM44Q6ZP01 1051 aaKnown RBP20.12■□□□□ 0.81
CHMP7-206ENST00000519529 H2AFVQ71UI9 128 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 SDR16C5Q8N3Y7 309 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 ARL10Q8N8L6 244 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 KYQ8NBH2 561 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 SNIP1Q8TAD8 396 aaKnown RBP20.12■□□□□ 0.81
CHMP7-206ENST00000519529 OR1E3Q8WZA6 343 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 NUS1Q96E22 293 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 CCDC3Q9BQI4 270 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 WDR26Q9H7D7 661 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 MRPL40Q9NQ50 206 aaKnown RBP20.12■□□□□ 0.81
CHMP7-206ENST00000519529 UVRAGQ9P2Y5 699 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 NENFQ9UMX5 172 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 ATRXP46100 2492 aa20.12■□□□□ 0.81
CHMP7-206ENST00000519529 CBFA2T2O43439 604 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 PROSCO94903 275 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 MAP3K6O95382 1288 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 CYP2A6P11509 494 aaPredicted RBP20.11■□□□□ 0.81
CHMP7-206ENST00000519529 GARSP41250 739 aaKnown RBP20.11■□□□□ 0.81
CHMP7-206ENST00000519529 ARSEP51690 589 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 CCDC173Q0VFZ6 552 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 SLC18A3Q16572 532 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 C3orf38Q5JPI3 329 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 RALGPS1Q5JS13 557 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 ARMC12Q5T9G4 340 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 NCBP2-AS2Q69YL0 99 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 SPECC1LQ69YQ0 1117 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 PNCKQ6P2M8 343 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 LRRC49Q8IUZ0 686 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 PELI3Q8N2H9 469 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.11■□□□□ 0.81
CHMP7-206ENST00000519529 OR8K1Q8NGG5 319 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 FAM71BQ8TC56 605 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 SPOCK2Q92563 424 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 COQ10AQ96MF6 247 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 LGR4Q9BXB1 951 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 POLR1BQ9H9Y6 1135 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 FGF22Q9HCT0 170 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 ZNHIT6Q9NWK9 470 aaKnown RBP20.11■□□□□ 0.81
CHMP7-206ENST00000519529 DGKBQ9Y6T7 804 aa20.11■□□□□ 0.81
CHMP7-206ENST00000519529 GOLGA6CA6NDK9 693 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 GOLGA6BA6NDN3 693 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 CASC3O15234 703 aaKnown RBP20.1■□□□□ 0.81
CHMP7-206ENST00000519529 HEXIM1O94992 359 aaKnown RBP20.1■□□□□ 0.81
CHMP7-206ENST00000519529 PGLSO95336 258 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 GOLGA6DP0CG33 693 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 CTPS1P17812 591 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 TRIM23P36406 574 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 TAS2R40P59535 323 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 TRIM14Q14142 442 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 ARHGEF7Q14155 803 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 SPIDRQ14159 915 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 PAFAH1B3Q15102 231 aaKnown RBP20.1■□□□□ 0.81
CHMP7-206ENST00000519529 TSR1Q2NL82 804 aaKnown RBP20.1■□□□□ 0.81
CHMP7-206ENST00000519529 ANKRD20A8PQ5CZ79 823 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 TAF8Q7Z7C8 310 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 MAP7D3Q8IWC1 876 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 LSMEM2Q8N112 164 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 ATXN7L3BQ96GX2 97 aa20.1■□□□□ 0.81
CHMP7-206ENST00000519529 RBM15Q96T37 977 aaKnown RBP eCLIP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms