RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TBATAQ96M53 351 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 HEPHQ9BQS7 1158 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 OSBPL1AQ9BXW6 950 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 GPR63Q9BZJ6 419 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 ZDHHC6Q9H6R6 413 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 CATSPERZQ9NTU4 200 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 PCMTD2Q9NV79 361 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 ELOVL2Q9NXB9 296 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 SLCO3A1Q9UIG8 710 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 CDH22Q9UJ99 828 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 GRID1Q9ULK0 1009 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 PLA2G4CQ9UP65 541 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 VPS9D1Q9Y2B5 631 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 ANKRD6Q9Y2G4 727 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 PPIL1Q9Y3C6 166 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 PKP3Q9Y446 797 aa15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 ZNF106Q9H2Y7 1883 aaKnown RBP15.1■□□□□ 0.01
TRAPPC9-205ENST00000518839 COL4A3Q01955 1670 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 CCDC162PA2VCL2 907 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 CAPN8A6NHC0 703 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 PIGNO95427 931 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 GOT2P00505 430 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 AHSGP02765 367 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 PRKCGP05129 697 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 SLC8A1P32418 973 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 HMGCLP35914 325 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 ABL2P42684 1182 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 ARSDP51689 593 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 CTBP1Q13363 440 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 LRRC14Q15048 493 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 GAB4Q2WGN9 574 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 FASTKD1Q53R41 847 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 TAF1BQ53T94 588 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 AARS2Q5JTZ9 985 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 LVRNQ6Q4G3 990 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 KYAT3Q6YP21 454 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 DPY19L3Q6ZPD9 716 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 EP400NLQ6ZTU2 488 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 Q6ZVU0 165 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 USP45Q70EL2 814 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 CCDC91Q7Z6B0 441 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 PTAR1Q7Z6K3 402 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 C12orf40Q86WS4 652 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 DENND6AQ8IWF6 608 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 OR4K2Q8NGD2 314 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 OR13C4Q8NGS5 318 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 HCAR2Q8TDS4 363 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 FRS2Q8WU20 508 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 TSPAN17Q96FV3 270 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 CHMP6Q96FZ7 201 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 TSNARE1Q96NA8 513 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 LYSMD1Q96S90 227 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 TCF12Q99081 682 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 PAIP2Q9BPZ3 127 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 TRMT61BQ9BVS5 477 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 NSRP1Q9H0G5 558 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 VPS11Q9H270 941 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 SNX15Q9NRS6 342 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 INTS10Q9NVR2 710 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 EPS15L1Q9UBC2 864 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 MTO1Q9Y2Z2 717 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 PLLPQ9Y342 182 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 KCTD3Q9Y597 815 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 PRRC2BQ5JSZ5 2229 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 SCN8AQ9UQD0 1980 aa15.09■□□□□ 0.01
TRAPPC9-205ENST00000518839 FAM95CA0A1B0GW59 222 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 TRIM24O15164 1050 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 CD3EAPO15446 510 aaKnown RBP15.08■□□□□ 0
TRAPPC9-205ENST00000518839 BNIP3LO60238 219 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 CRABP2P29373 138 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 PTPN5P54829 565 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 SLC12A2P55011 1212 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 WDR4P57081 412 aaKnown RBP15.08■□□□□ 0
TRAPPC9-205ENST00000518839 TMPRSS15P98073 1019 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 MPP1Q00013 466 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 POU4F1Q01851 419 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 DLX2Q07687 328 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-205ENST00000518839 DBN1Q16643 649 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 RNF187Q5TA31 235 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-205ENST00000518839 BRAT1Q6PJG6 821 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 GDPD4Q6W3E5 623 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 RGS9BPQ6ZS82 235 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 TRIM42Q8IWZ5 723 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 TERB1Q8NA31 727 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 OR2A12Q8NGT7 310 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 GDAP1Q8TB36 358 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 CYB5D2Q8WUJ1 264 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.08■□□□□ 0
TRAPPC9-205ENST00000518839 POMKQ9H5K3 350 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 ZFYVE1Q9HBF4 777 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 POLR3BQ9NW08 1133 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-205ENST00000518839 IL17CQ9P0M4 197 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 TLK1Q9UKI8 766 aa15.08■□□□□ 0
TRAPPC9-205ENST00000518839 MUC22E2RYF6 1773 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-205ENST00000518839 TSPAN11A1L157 253 aa15.07■□□□□ 0
TRAPPC9-205ENST00000518839 AURKAO14965 403 aa15.07■□□□□ 0
TRAPPC9-205ENST00000518839 FAM107AO95990 144 aa15.07■□□□□ 0
TRAPPC9-205ENST00000518839 DHRS4L1P0CG22 281 aa15.07■□□□□ 0
TRAPPC9-205ENST00000518839 COL6A2P12110 1019 aa15.07■□□□□ 0
TRAPPC9-205ENST00000518839 CTPS1P17812 591 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms