RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 BAHCC1Q9P281 2608 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MIA3Q5JRA6 1907 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GOLGA6L9A6NEM1 432 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZNF487B1APH4 448 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FAM229AH3BQW9 127 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 K7ESF4 209 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KCNK3O14649 394 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MFSD11O43934 449 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PRAMEF11O60813 436 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NEBLO76041 1014 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TJP3O95049 919 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CD160O95971 181 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SP9P0CG40 484 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ACADMP11310 421 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MSNP26038 577 aaKnown RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RHOAP61586 193 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SNRPD1P62314 119 aaKnown RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RAD51Q06609 339 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 IL10RBQ08334 325 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ITKQ08881 620 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DMWDQ09019 674 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 AP1B1Q10567 949 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SLC10A2Q12908 348 aaPredicted RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ENPP2Q13822 863 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PAFAH1B3Q15102 231 aaKnown RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CYTH1Q15438 398 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 INO80DQ53TQ3 878 aaPredicted RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CARD16Q5EG05 197 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 C9orf64Q5T6V5 341 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 AFMIDQ63HM1 303 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NCBP2-AS2Q69YL0 99 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SLC9A4Q6AI14 798 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 AADACL2Q6P093 401 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LETMD1Q6P1Q0 360 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 POMZP3Q6PJE2 187 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NPNTQ6UXI9 565 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LINC00114Q6XXX2 140 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DPY19L3Q6ZPD9 716 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 B4GALNT4Q76KP1 1039 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 BZW1Q7L1Q6 419 aaKnown RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LONP2Q86WA8 852 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LRRC49Q8IUZ0 686 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MMAAQ8IVH4 418 aaKnown RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MAML2Q8IZL2 1156 aaPredicted RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 STK40Q8N2I9 435 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 BBS5Q8N3I7 341 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ARHGEF39Q8N4T4 335 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ATPAF2Q8N5M1 289 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PLD5Q8N7P1 536 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FRS2Q8WU20 508 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 UBE2Q2Q8WVN8 375 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CASKIN2Q8WXE0 1202 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OR8D1Q8WZ84 308 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ALG3Q92685 438 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PRCCQ92733 491 aaPredicted RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 P3H4Q92791 437 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PTPRN2Q92932 1015 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HAUS1Q96CS2 278 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TRIM44Q96DX7 344 aaPredicted RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HES6Q96HZ4 224 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CCDC114Q96M63 670 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CINPQ9BW66 212 aaPredicted RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OSBPL8Q9BZF1 889 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TPSD1Q9BZJ3 242 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TM6SF2Q9BZW4 377 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SLC6A17Q9H1V8 727 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ACSS3Q9H6R3 686 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RBM22Q9NW64 420 aaKnown RBP eCLIP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SAE1Q9UBE0 346 aaPredicted RBP5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MCM8Q9UJA3 840 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HS3ST2Q9Y278 367 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 INVSQ9Y283 1065 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 COL4A2P08572 1712 aa5.88□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NUP205Q92621 2012 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 hCG_1818297A0A087WSY0 165 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 USP27XA6NNY8 438 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 F8W735 103 aaPredicted RBP5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 H7C0C1 242 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MCF2LO15068 1137 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CEP104O60308 925 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DLX3O60479 287 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MAFKO60675 156 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TMCC1O94876 653 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SLITRK5O94991 958 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ALX3O95076 343 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KCNH1O95259 989 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PAPSS2O95340 614 aaPredicted RBP5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 POP4O95707 220 aaKnown RBP5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 IGSF6O95976 241 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 IL1BP01584 269 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DNTTP04053 509 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PECAM1P16284 738 aaPredicted RBP5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GABRG2P18507 467 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RAB6AP20340 208 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TGM2P21980 687 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HOXA6P31267 233 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CHRNA3P32297 505 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SLC8A1P32418 973 aa5.87□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GARSP41250 739 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms