RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 ZNF557Q8N988 423 aaPredicted RBP5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LPCAT1Q8NF37 534 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 OR4K2Q8NGD2 314 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 OR13C4Q8NGS5 318 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 OR6P1Q8NGX9 317 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 OR4L1Q8NH43 312 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZNF398Q8TD17 642 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 C10orf82Q8WW14 230 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SMG7Q92540 1137 aaKnown RBP5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 E2F7Q96AV8 911 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 EID2BQ96D98 161 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RMDN1Q96DB5 314 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ATXN7L3BQ96GX2 97 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 UBXN10Q96LJ8 280 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 C7orf26Q96N11 449 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SMIM14Q96QK8 99 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TUBGCP5Q96RT8 1024 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TCF12Q99081 682 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CDCA3Q99618 268 aaPredicted RBP5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GDF15Q99988 308 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TSSK1BQ9BXA7 367 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BBS2Q9BXC9 721 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CPEB1Q9BZB8 566 aaKnown RBP5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CEP44Q9C0F1 390 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 C20orf27Q9GZN8 174 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SUDS3Q9H7L9 328 aaPredicted RBP5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KCNK13Q9HB14 408 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TRPV4Q9HBA0 871 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NMRAL1Q9HBL8 299 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MAGEE1Q9HCI5 957 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FBXO6Q9NRD1 293 aaPredicted RBP5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 THAP1Q9NVV9 213 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZNF358Q9NW07 568 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HACD3Q9P035 362 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 IL17CQ9P0M4 197 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KLHL14Q9P2G3 628 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 COPG2Q9UBF2 871 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TLK1Q9UKI8 766 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CORO1CQ9ULV4 474 aaPredicted RBP5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ACOT9Q9Y305 439 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 VWA7Q9Y334 891 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PPIL1Q9Y3C6 166 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MRPS23Q9Y3D9 190 aaKnown RBP5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KIAA1549LQ6ZVL6 1849 aa5.44□□□□□ -1.54
SCARNA20.4-201ENST00000516969 A0A0J9YYE9 177 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 OR51F1A6NGY5 319 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 WASH3PC4AMC7 463 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NEDD8-MDP1E9PL57 170 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CCL22O00626 93 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PHGDHO43175 533 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HOXC11O43248 304 aaPredicted RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BUD23O43709 281 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KLHL2O95198 593 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 POP4O95707 220 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 IGSF6O95976 241 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TRBC1P01850 177 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SERPINE1P05121 402 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 APOA4P06727 396 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DLDP09622 509 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PABPC1P11940 636 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CPA3P15088 417 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 STMN1P16949 149 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HOXB8P17481 243 aaPredicted RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CD9P21926 228 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KCNA4P22459 653 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FDXRP22570 491 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GRK2P25098 689 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HMGCLP35914 325 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SLC26A3P40879 764 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ABL2P42684 1182 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GRIA4P48058 902 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NRIP1P48552 1158 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 STK19P49842 368 aaPredicted RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SUOXP51687 545 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 STC1P52823 247 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CDKN2DP55273 166 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SNRPD1P62314 119 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TMPRSS15P98073 1019 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 XIAPP98170 497 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ECT2LQ008S8 904 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BCL2L1Q07817 233 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CCDC15Q0P6D6 951 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DLG1Q12959 904 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 STX3Q13277 289 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PEX6Q13608 980 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SEMA3AQ14563 771 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NUMA1Q14980 2115 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PTPRRQ15256 657 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DHCR24Q15392 516 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RAB30Q15771 203 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GAB4Q2WGN9 574 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MYLK3Q32MK0 819 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 EML3Q32P44 896 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HSF5Q4G112 596 aaPredicted RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TAF1BQ53T94 588 aaPredicted RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RBM20Q5T481 1227 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ARMC12Q5T9G4 340 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HECTD2Q5U5R9 776 aa5.43□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZNF549Q6P9A3 640 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms