RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 LGR4Q9BXB1 951 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 ABHD10Q9NUJ1 306 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 CTTNBP2NLQ9P2B4 639 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 RP1P56715 2156 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 CPED1A4D0V7 1026 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 BRINP1O60477 761 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 HEXIM1O94992 359 aaKnown RBP17.72■□□□□ 0.43
SFXN1-212ENST00000515791 RASGRP1O95267 797 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 CPP00450 1065 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 PDHA1P08559 390 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 TMEM253P0C7T8 217 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 MAN1A1P33908 653 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 EIF2S3P41091 472 aaKnown RBP17.72■□□□□ 0.43
SFXN1-212ENST00000515791 BLKP51451 505 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 SLC10A2Q12908 348 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-212ENST00000515791 TRIM14Q14142 442 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 NR0B2Q15466 257 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 PNCKQ6P2M8 343 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 LVRNQ6Q4G3 990 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 HID1Q8IV36 788 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 FSTL5Q8N475 847 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-212ENST00000515791 MAPK15Q8TD08 544 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 SCRN2Q96FV2 425 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 WDR92Q96MX6 357 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 TSGA13Q96PP4 275 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 RBM15Q96T37 977 aaKnown RBP eCLIP17.72■□□□□ 0.43
SFXN1-212ENST00000515791 FGF22Q9HCT0 170 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 PHTF1Q9UMS5 762 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 AK5Q9Y6K8 562 aa17.72■□□□□ 0.43
SFXN1-212ENST00000515791 NPIPB15A6NHN6 443 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-212ENST00000515791 PGLSO95336 258 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 MAP3K6O95382 1288 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 FUCA1P04066 466 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 TPM3P06753 285 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 ANXA6P08133 673 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 HOXB3P14651 431 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-212ENST00000515791 HTR1BP28222 390 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 VIPR1P32241 457 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 PDK2Q15119 407 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 ELOCQ15369 112 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 HSD11B1LQ7Z5J1 315 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 SDR16C5Q8N3Y7 309 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 OR56A4Q8NGH8 313 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 SNIP1Q8TAD8 396 aaKnown RBP17.71■□□□□ 0.43
SFXN1-212ENST00000515791 CTNNBL1Q8WYA6 563 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-212ENST00000515791 RAPGEF5Q92565 580 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 CRELD1Q96HD1 420 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 DEPDC7Q96QD5 511 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 SMIM14Q96QK8 99 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 NT5MQ9NPB1 228 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 MRPL40Q9NQ50 206 aaKnown RBP17.71■□□□□ 0.43
SFXN1-212ENST00000515791 EVA1BQ9NVM1 165 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 KLQ9UEF7 1012 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 RABGEF1Q9UJ41 708 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 IGSF10Q6WRI0 2623 aa17.71■□□□□ 0.43
SFXN1-212ENST00000515791 A0A0U1RQS6 177 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 C3orf70A6NLC5 250 aaPredicted RBP17.7■□□□□ 0.42
SFXN1-212ENST00000515791 TNFRSF10CO14798 259 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 MATN3O15232 486 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 CBFA2T2O43439 604 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 MFAP3LO75121 409 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 CSO75390 466 aaKnown RBP17.7■□□□□ 0.42
SFXN1-212ENST00000515791 KDELR1P24390 212 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 CCNCP24863 283 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 SSR1P43307 286 aaKnown RBP17.7■□□□□ 0.42
SFXN1-212ENST00000515791 PDX1P52945 283 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 GBE1Q04446 702 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 TBX2Q13207 712 aaPredicted RBP17.7■□□□□ 0.42
SFXN1-212ENST00000515791 ISXQ2M1V0 245 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 CRTC1Q6UUV9 634 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 TECPR1Q7Z6L1 1165 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 TSPAN33Q86UF1 283 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 PDZD3Q86UT5 571 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 BBS5Q8N3I7 341 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 KCTD6Q8NC69 237 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 SLC35G2Q8TBE7 412 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 ARRDC2Q8TBH0 407 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 PDCD6IPQ8WUM4 868 aaKnown RBP17.7■□□□□ 0.42
SFXN1-212ENST00000515791 LRRN4Q8WUT4 740 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 DTD2Q96FN9 168 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 SEMA3CQ99985 751 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 TEX101Q9BY14 249 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 PADI4Q9UM07 663 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 ENTPD2Q9Y5L3 495 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 RAI2Q9Y5P3 530 aa17.7■□□□□ 0.42
SFXN1-212ENST00000515791 PSMD11O00231 422 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 NTN3O00634 580 aaPredicted RBP17.69■□□□□ 0.42
SFXN1-212ENST00000515791 USP12O75317 370 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 DXOO77932 396 aaKnown RBP17.69■□□□□ 0.42
SFXN1-212ENST00000515791 MTA2O94776 668 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 SOD1P00441 154 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 PRLP01236 227 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 TNFP01375 233 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 ALPIP09923 528 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 ITPKBP27987 946 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 GJC1P36383 396 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 ETV3P41162 512 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 RPIAP49247 311 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 ACOX1Q15067 660 aa17.69■□□□□ 0.42
SFXN1-212ENST00000515791 TCEA2Q15560 299 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms