RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 FAM170AA1A519 330 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 GAGE10A6NGK3 116 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 TAF4O00268 1085 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 CHL1O00533 1208 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 LINC01565O15544 149 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 GUCY1B2O75343 617 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 SCGB1D1O95968 90 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 PLGP00747 810 aaPredicted RBP3.34□□□□□ -1.87
HERC4-215ENST00000515753 FCGR1AP12314 374 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 ALOX12P18054 663 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 PCYT1AP49585 367 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 COMPP49747 757 aaPredicted RBP3.34□□□□□ -1.87
HERC4-215ENST00000515753 HILS1P60008 231 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 YWHAZP63104 245 aaKnown RBP3.34□□□□□ -1.87
HERC4-215ENST00000515753 ECT2LQ008S8 904 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 KIF5AQ12840 1032 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 MYBPC2Q14324 1141 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 LPIN1Q14693 890 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 IZUMO4Q1ZYL8 232 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 ALDH1L2Q3SY69 923 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 FBXO43Q4G163 708 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 FAM205BPQ63HN1 556 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 ACAD10Q6JQN1 1059 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 FBXL22Q6P050 247 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 LRRC8DQ7L1W4 858 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 FOXP4Q8IVH2 680 aaPredicted RBP3.34□□□□□ -1.87
HERC4-215ENST00000515753 RPAP2Q8IXW5 612 aaPredicted RBP3.34□□□□□ -1.87
HERC4-215ENST00000515753 ANKRD52Q8NB46 1076 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 DNAAF1Q8NEP3 725 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 TNIP2Q8NFZ5 429 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 OR14A16Q8NHC5 309 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 SNAPC3Q92966 411 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 ZUFSPQ96AP4 578 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 OTULINQ96BN8 352 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 LHPPQ9H008 270 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 CDT1Q9H211 546 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 MROH8Q9H579 483 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 ANKEF1Q9NU02 776 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 BEX4Q9NWD9 120 aaPredicted RBP3.34□□□□□ -1.87
HERC4-215ENST00000515753 ALKBH4Q9NXW9 302 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 HCN3Q9P1Z3 774 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 POGZQ7Z3K3 1410 aa3.34□□□□□ -1.88
HERC4-215ENST00000515753 WDR7Q9Y4E6 1490 aa3.34□□□□□ -1.88
HERC4-215ENST00000515753 A0A0U1RQF3 1178 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 A0A0U1RQJ8 604 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 ARHGAP10A1A4S6 786 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 PI4KAP2A4QPH2 592 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 B4DLN1 442 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 CEP104O60308 925 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 HNRNPA1P09651 372 aaKnown RBP eCLIP3.33□□□□□ -1.88
HERC4-215ENST00000515753 ZNF8P17098 575 aaPredicted RBP3.33□□□□□ -1.88
HERC4-215ENST00000515753 CHATP28329 748 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 KRT20P35900 424 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 MXI1P50539 228 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 ARF3P61204 181 aaPredicted RBP3.33□□□□□ -1.88
HERC4-215ENST00000515753 ARF1P84077 181 aaKnown RBP3.33□□□□□ -1.88
HERC4-215ENST00000515753 CTTNQ14247 550 aaKnown RBP3.33□□□□□ -1.88
HERC4-215ENST00000515753 KRT32Q14532 448 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 BAK1Q16611 211 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 SPECC1Q5M775 1068 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 CCDC129Q6ZRS4 1044 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 MON1AQ86VX9 555 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 ARMC8Q8IUR7 673 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 GPT2Q8TD30 523 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 ELP4Q96EB1 424 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 SDF4Q9BRK5 362 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 SLC25A33Q9BSK2 321 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 MMTAG2Q9BU76 263 aaKnown RBP3.33□□□□□ -1.88
HERC4-215ENST00000515753 AP1M1Q9BXS5 423 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 TM6SF1Q9BZW5 370 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 C6orf106Q9H6K1 298 aaPredicted RBP3.33□□□□□ -1.88
HERC4-215ENST00000515753 SH3GLB2Q9NR46 395 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 KRT84Q9NSB2 600 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 NDRG3Q9UGV2 375 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 PCDHGB1Q9Y5G3 927 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 UGGT2Q9NYU1 1516 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 ADCY10Q96PN6 1610 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 CUL7Q14999 1698 aa3.33□□□□□ -1.88
HERC4-215ENST00000515753 IGLV5-52A0A0A0MRZ9 124 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 A0A1B0GVM2 712 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 PABPN1LA6NDY0 278 aaKnown RBP3.32□□□□□ -1.88
HERC4-215ENST00000515753 TEX22C9J3V5 150 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 ITM2AO43736 263 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 TIPRLO75663 272 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 PPP1R3DO95685 299 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 PRSS2P07478 247 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 SRD5A1P18405 259 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 CD72P21854 359 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 PSMA4P25789 261 aaKnown RBP3.32□□□□□ -1.88
HERC4-215ENST00000515753 FMO4P31512 558 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 ARL1P40616 181 aaPredicted RBP3.32□□□□□ -1.88
HERC4-215ENST00000515753 PDLIM4P50479 330 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 ART1P52961 327 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 CUL4AQ13619 759 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 NAA25Q14CX7 972 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 HLFQ16534 295 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 TSTQ16762 297 aaKnown RBP3.32□□□□□ -1.88
HERC4-215ENST00000515753 ZNF766Q5HY98 468 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 OTUD3Q5T2D3 398 aaPredicted RBP3.32□□□□□ -1.88
HERC4-215ENST00000515753 HAUS3Q68CZ6 603 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms