RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 FADS3Q9Y5Q0 445 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 FANCMQ8IYD8 2048 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 TRPM6Q9BX84 2022 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 SPTBN4Q9H254 2564 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 A0A1W2PP55 124 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 ESYT3A0FGR9 886 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 MAGEB16A2A368 324 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 RGSL1A5PLK6 1076 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 MROH6A6NGR9 719 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 NPIPB15A6NHN6 443 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 SDR42E2A6NKP2 422 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 PROB1E7EW31 1015 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 CTIFO43310 598 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 LAMTOR5O43504 91 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 XPAP23025 273 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 ADRA1DP25100 572 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 VIPR1P32241 457 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 HNF1BP35680 557 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 HMGCLP35914 325 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 PLTPP55058 493 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 ARL4CP56559 192 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 RALGDSQ12967 914 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 OLIG2Q13516 323 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 TAF1AQ15573 450 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 HIF1AQ16665 826 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 ZNF528Q3MIS6 628 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 DNAJC21Q5F1R6 531 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 ANO7Q6IWH7 933 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 KIAA1324Q6UXG2 1013 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 NLRP9Q7RTR0 991 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 ERMP1Q7Z2K6 904 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 WDR5BQ86VZ2 330 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 CCNJLQ8IV13 435 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 MAML2Q8IZL2 1156 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 TTC30BQ8N4P2 665 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 DNAAF3Q8N9W5 541 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 DTX3LQ8TDB6 740 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 ASB12Q8WXK4 309 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 SIGLEC10Q96LC7 697 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 NAT9Q9BTE0 207 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 KIFC1Q9BW19 673 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 SLC6A17Q9H1V8 727 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 NEUROG2Q9H2A3 272 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 FAM86C1Q9NVL1 165 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 KCTD5Q9NXV2 234 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 BCCIPQ9P287 314 aaKnown RBP eCLIP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 NFKBIL1Q9UBC1 381 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 B4GALT6Q9UBX8 382 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 MTRF1LQ9UGC7 380 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 SERGEFQ9UGK8 458 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 RAB21Q9UL25 225 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 NUMA1Q14980 2115 aa12.01□□□□□ -0.49
PDLIM5-220ENST00000514830 HEATR9A2RTY3 570 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 AXIN1O15169 862 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 RNASEH2AO75792 299 aaKnown RBP12□□□□□ -0.49
PDLIM5-220ENST00000514830 CRTAMO95727 393 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 CARSP49589 748 aaKnown RBP12□□□□□ -0.49
PDLIM5-220ENST00000514830 ADPRHP54922 357 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 ACVR1Q04771 509 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 ERCC6LQ2NKX8 1250 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 MAP7D1Q3KQU3 841 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 PCID2Q5JVF3 399 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 SYCP2LQ5T4T6 812 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 KIAA1161Q6NSJ0 714 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 CRTC1Q6UUV9 634 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12□□□□□ -0.49
PDLIM5-220ENST00000514830 CYP2U1Q7Z449 544 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 KDELC2Q7Z4H8 507 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 TMC3Q7Z5M5 1100 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 TRIM69Q86WT6 500 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 SLC25A41Q8N5S1 370 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 APOL2Q9BQE5 337 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 CDH19Q9H159 772 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 WSB2Q9NYS7 404 aaPredicted RBP12□□□□□ -0.49
PDLIM5-220ENST00000514830 SOX13Q9UN79 622 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 ZNF711Q9Y462 761 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 SPO11Q9Y5K1 396 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 TEX264Q9Y6I9 313 aa12□□□□□ -0.49
PDLIM5-220ENST00000514830 IGHV1OR15-9A0A0B4J2B8 117 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 FAM237BA0A1B0GVD1 139 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 LRRC72A6NJI9 287 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 GOLGA8MH3BSY2 632 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 LDB2O43679 373 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 ALPIP09923 528 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 CTPS1P17812 591 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 LHCGRP22888 699 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 NUDT1P36639 197 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 STC1P52823 247 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 FRG1Q14331 258 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 CNGA3Q16281 694 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 POM121L1PQ3SYA9 428 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 TMEM259Q4ZIN3 620 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 FNBP1LQ5T0N5 605 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 CERCAMQ5T4B2 595 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 ZDHHC20Q5W0Z9 365 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 LIPIQ6XZB0 460 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 CCNI2Q6ZMN8 369 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 CENPUQ71F23 418 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 TMEM135Q86UB9 458 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms