RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 RBBP8Q99708 897 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 IQCGQ9H095 443 aaKnown RBP16.04■□□□□ 0.16
NUP54-214ENST00000514307 C8orf33Q9H7E9 229 aaPredicted RBP16.04■□□□□ 0.16
NUP54-214ENST00000514307 UBE2ZQ9H832 354 aaPredicted RBP16.04■□□□□ 0.16
NUP54-214ENST00000514307 UGT1A7Q9HAW7 530 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 UGT1A10Q9HAW8 530 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 UGT1A8Q9HAW9 530 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 ZFYVE1Q9HBF4 777 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 DKK3Q9UBP4 350 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 DCDC2Q9UHG0 476 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 SPO11Q9Y5K1 396 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 CHD9Q3L8U1 2897 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 TMEM120BA0PK00 339 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 H3BQ06 376 aaPredicted RBP16.03■□□□□ 0.16
NUP54-214ENST00000514307 TM9SF1O15321 606 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 ZWINTO95229 277 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 AHSGP02765 367 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 PYGBP11216 843 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 KCNA5P22460 613 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 PMLP29590 882 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 TYK2P29597 1187 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 HNF1BP35680 557 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 CD151P48509 253 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 GALK1P51570 392 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 SUOXP51687 545 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 LIMK2P53671 638 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 SLC18A2Q05940 514 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 GABPB1Q06547 395 aaPredicted RBP16.03■□□□□ 0.16
NUP54-214ENST00000514307 HNRNPA1L2Q32P51 320 aaKnown RBP16.03■□□□□ 0.16
NUP54-214ENST00000514307 SDE2Q6IQ49 451 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 AFTPHQ6ULP2 937 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 SERPINA13PQ6UXR4 307 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 PTAR1Q7Z6K3 402 aaPredicted RBP16.03■□□□□ 0.16
NUP54-214ENST00000514307 CBARPQ8N350 705 aaPredicted RBP16.03■□□□□ 0.16
NUP54-214ENST00000514307 C2CD4AQ8NCU7 369 aaPredicted RBP16.03■□□□□ 0.16
NUP54-214ENST00000514307 ST13P5Q8NFI4 369 aaPredicted RBP16.03■□□□□ 0.16
NUP54-214ENST00000514307 OR4K2Q8NGD2 314 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 OR13J1Q8NGT2 312 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 KCNV2Q8TDN2 545 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 MZB1Q8WU39 189 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 OR8D1Q8WZ84 308 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 KLHL32Q96NJ5 620 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 LYSMD1Q96S90 227 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 P2RY13Q9BPV8 354 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 RPP25Q9BUL9 199 aaKnown RBP16.03■□□□□ 0.16
NUP54-214ENST00000514307 RHOJQ9H4E5 214 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 RAD18Q9NS91 495 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 THAP10Q9P2Z0 257 aaPredicted RBP16.03■□□□□ 0.16
NUP54-214ENST00000514307 APPL1Q9UKG1 709 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 TLK1Q9UKI8 766 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 FAM50BQ9Y247 325 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 STARD13Q9Y3M8 1113 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 ZNF711Q9Y462 761 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 KCTD3Q9Y597 815 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 SHROOM3Q8TF72 1996 aa16.03■□□□□ 0.16
NUP54-214ENST00000514307 CCDC162PA2VCL2 907 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 GRXCR2A6NFK2 248 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 COPEO14579 308 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 MBTPS2O43462 519 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 UGT2B4P06133 528 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 HNRNPLP14866 589 aaKnown RBP eCLIP16.02■□□□□ 0.16
NUP54-214ENST00000514307 GLULP15104 373 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 CTPS1P17812 591 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 GKP32189 559 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 LEPRP48357 1165 aaKnown RBP16.02■□□□□ 0.16
NUP54-214ENST00000514307 ZNF140P52738 457 aaPredicted RBP16.02■□□□□ 0.16
NUP54-214ENST00000514307 SLC12A2P55011 1212 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 TMPRSS15P98073 1019 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 CTBP1Q13363 440 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 PUS10Q3MIT2 529 aaKnown RBP16.02■□□□□ 0.16
NUP54-214ENST00000514307 ZNF805Q5CZA5 627 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 AARS2Q5JTZ9 985 aaKnown RBP16.02■□□□□ 0.16
NUP54-214ENST00000514307 FSTL4Q6MZW2 842 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 PHTF2Q8N3S3 785 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 TTC30BQ8N4P2 665 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 BANPQ8N9N5 519 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 CHST14Q8NCH0 376 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 DYDC1Q8WWB3 177 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 HLA-CQ95604 372 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.02■□□□□ 0.16
NUP54-214ENST00000514307 DNAJC1Q96KC8 554 aaKnown RBP16.02■□□□□ 0.16
NUP54-214ENST00000514307 PHF7Q9BWX1 381 aaPredicted RBP16.02■□□□□ 0.16
NUP54-214ENST00000514307 CATSPERZQ9NTU4 200 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 IL17CQ9P0M4 197 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 GRID1Q9ULK0 1009 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 CORO1CQ9ULV4 474 aaPredicted RBP16.02■□□□□ 0.16
NUP54-214ENST00000514307 PSAT1Q9Y617 370 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 SLC30A1Q9Y6M5 507 aa16.02■□□□□ 0.16
NUP54-214ENST00000514307 HELZP42694 1942 aaKnown RBP16.02■□□□□ 0.15
NUP54-214ENST00000514307 MYO18AQ92614 2054 aaKnown RBP16.01■□□□□ 0.15
NUP54-214ENST00000514307 CHD5Q8TDI0 1954 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 CAPN8A6NHC0 703 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 SRRM3A6NNA2 597 aaPredicted RBP16.01■□□□□ 0.15
NUP54-214ENST00000514307 GOLGA8TH3BQL2 631 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 H7C0S8 307 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 BUD23O43709 281 aaKnown RBP16.01■□□□□ 0.15
NUP54-214ENST00000514307 RFPL1O75677 317 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 GOT2P00505 430 aaKnown RBP16.01■□□□□ 0.15
NUP54-214ENST00000514307 CHN1P15882 459 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 OGNP20774 298 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms