RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ISM2	Q6H9L7	571 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	AAGAB	Q6PD74	315 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZNF793	Q6ZN11	406 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FAM57B	Q71RH2	274 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CYB5R4	Q7L1T6	521 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	BHLHA9	Q7RTU4	235 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RNF168	Q8IYW5	571 aa	Predicted RBP	3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TMEM217	Q8N7C4	229 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	POGLUT1	Q8NBL1	392 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZNF653	Q96CK0	615 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	BBS4	Q96RK4	519 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SEPT5	Q99719	369 aa	Predicted RBP	3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ADPGK	Q9BRR6	497 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	APOL6	Q9BWW8	343 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TM2D2	Q9BX73	214 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SPRTN	Q9H040	489 aa	Predicted RBP	3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	OSGEPL1	Q9H4B0	414 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	EBF3	Q9H4W6	596 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PAPOLB	Q9NRJ5	636 aa	Known RBP	3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RNF146	Q9NTX7	359 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ARGLU1	Q9NWB6	273 aa	Predicted RBP	3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PSD3	Q9NYI0	1048 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TAB2	Q9NYJ8	693 aa		3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CPSF2	Q9P2I0	782 aa	Known RBP	3.54	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FAM237A	A0A1B0GTK4	181 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	OR2A25	A4D2G3	310 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TSPY2	A6NKD2	308 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267		A8MV72	311 aa	Predicted RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267		A8MXE2	369 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	BTBD18	B2RXH4	712 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CTDSP2	O14595	271 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	HS6ST1	O60243	411 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TBX10	O75333	385 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	NEURL1	O76050	574 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	NTN1	O95631	604 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	HSPA4L	O95757	839 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	HSP90AB1	P08238	724 aa	Known RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TSPY3	P0CV98	308 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TSPY8	P0CW00	308 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ST6GAL1	P15907	406 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZNF182	P17025	639 aa	Predicted RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CTNNA1	P35221	906 aa	Known RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SLC16A2	P36021	539 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ALDH7A1	P49419	539 aa	Known RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CAMP	P49913	170 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	STAT2	P52630	851 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PMS2	P54278	862 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RAD23A	P54725	363 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CLDN2	P57739	230 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TSPY1	Q01534	308 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	DRAP1	Q14919	205 aa	Predicted RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TCTN1	Q2MV58	587 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	USP41	Q3LFD5	358 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZSCAN23	Q3MJ62	389 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SYTL3	Q4VX76	610 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	AWAT1	Q58HT5	328 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CXorf66	Q5JRM2	361 aa	Predicted RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	C1orf141	Q5JVX7	400 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TTC39A	Q5SRH9	613 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	C6orf141	Q5SZD1	244 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	DAB2IP	Q5VWQ8	1189 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	KRT79	Q5XKE5	535 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PMS2CL	Q68D20	193 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SLFN11	Q7Z7L1	901 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CCDC25	Q86WR0	208 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZDHHC17	Q8IUH5	632 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MCEMP1	Q8IX19	187 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	KIAA2013	Q8IYS2	634 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FAM185A	Q8N0U4	392 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ARL14EP	Q8N8R7	260 aa	Predicted RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	IL17RC	Q8NAC3	791 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MCPH1	Q8NEM0	835 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GABPB2	Q8TAK5	448 aa	Predicted RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GSDMB	Q8TAX9	411 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	OTULIN	Q96BN8	352 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MOAP1	Q96BY2	351 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RNF183	Q96D59	192 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	OR2A14	Q96R47	310 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZWILCH	Q9H900	591 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	KIF9	Q9HAQ2	790 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	DECR2	Q9NUI1	292 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	NENF	Q9UMX5	172 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	EXO1	Q9UQ84	846 aa	Known RBP	3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CCL27	Q9Y4X3	112 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SMARCA2	P51531	1590 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ABCC8	Q09428	1581 aa		3.53	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	BICRA	Q9NZM4	1560 aa		3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267		A0A096LPK6	155 aa		3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267		A0A0A0MQY5	61 aa		3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	TRBV5-7	A0A0A0MS05	114 aa		3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	DPPA5	A6NC42	116 aa		3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	PAPSS1	O43252	624 aa	Predicted RBP	3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	MITF	O75030	526 aa	Predicted RBP	3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	SYF2	O95926	243 aa	Known RBP	3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	MMP3	P08254	477 aa		3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	MYZAP	P0CAP1	466 aa		3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	CTPS1	P17812	591 aa		3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	MCC	P23508	829 aa		3.52	□□□□□ -1.85
CALCOCO2-223	ENST00000514267	KLRC2	P26717	231 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms