RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 RFX6Q8HWS3 928 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 PELI3Q8N2H9 469 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 RNF10Q8N5U6 811 aaKnown RBP9.74□□□□□ -0.85
RNF4-221ENST00000513643 CCNYQ8ND76 341 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 RHBDD1Q8TEB9 315 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 SETD7Q8WTS6 366 aaKnown RBP9.74□□□□□ -0.85
RNF4-221ENST00000513643 UBE2Q2Q8WVN8 375 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 RBM41Q96IZ5 413 aaKnown RBP9.74□□□□□ -0.85
RNF4-221ENST00000513643 TEKT5Q96M29 485 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 DESI2Q9BSY9 194 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 C1QTNF7Q9BXJ2 289 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 SLC25A51Q9H1U9 297 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 UCKL1Q9NWZ5 548 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 TRIM10Q9UDY6 481 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 COQ6Q9Y2Z9 468 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 PCDHGA1Q9Y5H4 931 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 CSNK1G3Q9Y6M4 447 aa9.74□□□□□ -0.85
RNF4-221ENST00000513643 LRRK1Q38SD2 2015 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 LY6G6EA0A0G2JKS1 128 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 APOC4-APOC2K7ER74 178 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 PPP1R12AO14974 1030 aaPredicted RBP9.73□□□□□ -0.85
RNF4-221ENST00000513643 SCAMP1O15126 338 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 DDX3YO15523 660 aaKnown RBP9.73□□□□□ -0.85
RNF4-221ENST00000513643 IPO7O95373 1038 aaKnown RBP9.73□□□□□ -0.85
RNF4-221ENST00000513643 SOD1P00441 154 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 CPP00450 1065 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 APOC2P02655 101 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 CAPNS1P04632 268 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 ITGAVP06756 1048 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 FTH1P19P0C7X4 201 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 PYGMP11217 842 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 PTPN3P26045 913 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 HNF1BP35680 557 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 HNRNPKP61978 463 aaKnown RBP eCLIP9.73□□□□□ -0.85
RNF4-221ENST00000513643 DPTQ07507 201 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 KIF5AQ12840 1032 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 MTM1Q13496 603 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 PDE1CQ14123 709 aaPredicted RBP9.73□□□□□ -0.85
RNF4-221ENST00000513643 PTK2BQ14289 1009 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 INPP5AQ14642 412 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 ZFYVE27Q5T4F4 411 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 PNCKQ6P2M8 343 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 MACC1Q6ZN28 852 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 HSD11B1LQ7Z5J1 315 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 KLHDC8BQ8IXV7 354 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 FAM181AQ8N9Y4 354 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 PLA2G15Q8NCC3 412 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 OR4C6Q8NH72 309 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.73□□□□□ -0.85
RNF4-221ENST00000513643 DTD2Q96FN9 168 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 HES6Q96HZ4 224 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 ZNF830Q96NB3 372 aaPredicted RBP9.73□□□□□ -0.85
RNF4-221ENST00000513643 SMIM14Q96QK8 99 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 APOOQ9BUR5 198 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 KCTD5Q9NXV2 234 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.73□□□□□ -0.85
RNF4-221ENST00000513643 DGKBQ9Y6T7 804 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 U3KQA8 63 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 CELSR3Q9NYQ7 3312 aa9.73□□□□□ -0.85
RNF4-221ENST00000513643 SHROOM3Q8TF72 1996 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 LOC285095A0A1B0GVY8 99 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 CAPN8A6NHC0 703 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 HACD1B0YJ81 288 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 ANKRD66B4E2M5 251 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 K7ESM1 405 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 TPP1O14773 563 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 ARHGAP6O43182 974 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 MTSS1O43312 755 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 LZTS3O60299 673 aaPredicted RBP9.72□□□□□ -0.85
RNF4-221ENST00000513643 GCATO75600 419 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 EPOP01588 193 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 C1SP09871 688 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 ELFN1P0C7U0 828 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 TNNT1P13805 278 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 ZNF30P17039 623 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 STC1P52823 247 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 RWDD2BP57060 319 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 KIAA1024LP59773 190 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 DYNLT1P63172 113 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 AP1B1Q10567 949 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 KLF1Q13351 362 aaPredicted RBP9.72□□□□□ -0.85
RNF4-221ENST00000513643 NFATC4Q14934 902 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 NOMO1Q15155 1222 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 SMAD1Q15797 465 aaKnown RBP9.72□□□□□ -0.85
RNF4-221ENST00000513643 QPCTQ16769 361 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 INAVAQ3KP66 663 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 FAM182AQ5T1J6 154 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 CFAP58Q5T655 872 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 KCTD16Q68DU8 428 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 NYAP1Q6ZVC0 841 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 Q6ZVL8 140 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 B4GALNT4Q76KP1 1039 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 ZNF765Q7L2R6 523 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 PTAR1Q7Z6K3 402 aaPredicted RBP9.72□□□□□ -0.85
RNF4-221ENST00000513643 TSPAN33Q86UF1 283 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 LRRC8AQ8IWT6 810 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 EID2Q8N6I1 236 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 TFB1MQ8WVM0 346 aaKnown RBP9.72□□□□□ -0.85
RNF4-221ENST00000513643 P3H4Q92791 437 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 EID2BQ96D98 161 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms