RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 E9PAM4 449 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 H0Y3Z8 333 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 DGKIO75912 1065 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 TFE3P19532 575 aaPredicted RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 CDH5P33151 784 aaPredicted RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 PRKCIP41743 596 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 MBTD1Q05BQ5 628 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 RASA2Q15283 850 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 C15orf59Q2T9L4 293 aaPredicted RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 FGD3Q5JSP0 725 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 NT5DC1Q5TFE4 455 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ENPP7Q6UWV6 458 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SLC39A5Q6ZMH5 540 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PEG10Q86TG7 708 aaKnown RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 SAPCD2Q86UD0 394 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SLC9B2Q86UD5 537 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 FAM71AQ8IYT1 594 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 MICU2Q8IYU8 434 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ADCY4Q8NFM4 1077 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 OR5B17Q8NGF7 314 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 RDH11Q8TC12 318 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 DQX1Q8TE96 717 aaKnown RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 CLEC4DQ8WXI8 215 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 HAS1Q92839 578 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 FAM83CQ9BQN1 747 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 NKX2-4Q9H2Z4 354 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 CALML5Q9NZT1 146 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 RPS6KA6Q9UK32 745 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 A0A1W2PRU2 124 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 FAM221BA6H8Z2 402 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 H3BUI4 141 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ERAL1O75616 437 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 SEC24DO94855 1032 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 KCNH1O95259 989 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CYP1A2P05177 515 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 NT5EP21589 574 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 UGT1A5P35504 534 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TALDO1P37837 337 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 PLK1P53350 603 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 NRG3P56975 720 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 OC90Q02509 493 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 ARHGAP1Q07960 439 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MINDY4Q4G0A6 757 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MBLAC2Q68D91 279 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MSANTD2Q6P1R3 559 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 KRT77Q7Z794 578 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SH2D3CQ8N5H7 860 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 NPLOC4Q8TAT6 608 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ADAMTS15Q8TE58 950 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SHCBP1LQ9BZQ2 653 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 POMKQ9H5K3 350 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 RXFP1Q9HBX9 757 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SDHAF3Q9NRP4 125 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SERINC1Q9NRX5 453 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ALKBH4Q9NXW9 302 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 HMGXB4Q9UGU5 601 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 NAALADL1Q9UQQ1 740 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 HEMK1Q9Y5R4 338 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 LOC100653049A0A140TA62 436 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 AKAP8O43823 692 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 PEX1O43933 1283 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 KRT34O76011 436 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 WFS1O76024 890 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 IPO13O94829 963 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 PKMP14618 531 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 CD44P16070 742 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 ECT2LQ008S8 904 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MTAPQ13126 283 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 C2orf27AQ580R0 203 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 DGKKQ5KSL6 1271 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ARHGAP17Q68EM7 881 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ALKBH2Q6NS38 261 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ZNF852Q6ZMS4 543 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CFAP52Q8N1V2 620 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CAPSLQ8WWF8 208 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 PPCDCQ96CD2 204 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ZNF599Q96NL3 588 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 PACSIN1Q9BY11 444 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 OSBPL2Q9H1P3 480 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 WDR26Q9H7D7 661 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 DNAJC28Q9NX36 388 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 RRP15Q9Y3B9 282 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 ATRNL1Q5VV63 1379 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 KCNU1A8MYU2 1149 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 PI15O43692 258 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CLEC3AO75596 197 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 C22orf31O95567 290 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 IFNGP01579 166 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MYL12AP19105 171 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 EPORP19235 508 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 OGNP20774 298 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 SOX6P35712 828 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 RPL4P36578 427 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 LILRA4P59901 499 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SNTA1Q13424 505 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 LRRC23Q53EV4 343 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 RALGPS1Q5JS13 557 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CDKAL1Q5VV42 579 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 FAM151BQ6UXP7 276 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 NEK10Q6ZWH5 1172 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms