RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 C1orf232A0A0U1RR37 186 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 A0A1W2PQF6 199 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 TCRBV21S2A2A0A5A6 115 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 RNASEH2AO75792 299 aaKnown RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 PAPSS2O95340 614 aaPredicted RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 SLC4A1P02730 911 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 ADRB3P13945 408 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 H2AFXP16104 143 aaPredicted RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 CTPS1P17812 591 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 LPOP22079 712 aaPredicted RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 VIPR1P32241 457 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 STX2P32856 288 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 HADHAP40939 763 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 CRADDP78560 199 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 CRY1Q16526 586 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 MSS51Q4VC12 460 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 SPANXN3Q5MJ09 141 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 HP1BP3Q5SSJ5 553 aaPredicted RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 PKN3Q6P5Z2 889 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 KIAA1324Q6UXG2 1013 aaKnown RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 Q6ZS52 159 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 PARS2Q7L3T8 475 aaKnown RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 KBTBD6Q86V97 674 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 TMPRSS6Q8IU80 811 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 PGBD3Q8N328 593 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 SPEM1Q8N4L4 309 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 MREGQ8N565 214 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 FLCNQ8NFG4 579 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 TSTD1Q8NFU3 115 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 PBXIP1Q96AQ6 731 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 C9orf72Q96LT7 481 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 NSMCE3Q96MG7 304 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 MCCC1Q96RQ3 725 aaPredicted RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 LYSMD1Q96S90 227 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 KIFC1Q9BW19 673 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 PABPC3Q9H361 631 aaKnown RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 CDC42EP4Q9H3Q1 356 aaKnown RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 ZFYVE1Q9HBF4 777 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 RAD18Q9NS91 495 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 RIMKLBQ9ULI2 386 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 PPIL1Q9Y3C6 166 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 ZNF711Q9Y462 761 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.89□□□□□ -0.67
PFDN1-204ENST00000512707 RPS6KL1Q9Y6S9 549 aa10.89□□□□□ -0.67
PFDN1-204ENST00000512707 ZDBF2Q9HCK1 2354 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 A0A087WUV0 522 aaPredicted RBP10.88□□□□□ -0.67
PFDN1-204ENST00000512707 MID1O15344 667 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 STX7O15400 261 aaKnown RBP10.88□□□□□ -0.67
PFDN1-204ENST00000512707 SLC7A4O43246 635 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 BANF1O75531 89 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 USP1O94782 785 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 ACSL3O95573 720 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 IVLP07476 585 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 ALPIP09923 528 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 ELFN1P0C7U0 828 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 PIRTP0C851 137 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 TIMP2P16035 220 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 HNF1BP35680 557 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 COPAP53621 1224 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 RPS14P62263 151 aaKnown RBP10.88□□□□□ -0.67
PFDN1-204ENST00000512707 PRAMEP78395 509 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 IFFO1Q0D2I5 559 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 CRYMQ14894 314 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 FASTKD3Q14CZ7 662 aaKnown RBP10.88□□□□□ -0.67
PFDN1-204ENST00000512707 KYNUQ16719 465 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 TSTD2Q5T7W7 516 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 ZDHHC20Q5W0Z9 365 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 KIAA1211LQ6NV74 962 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 FBXO38Q6PIJ6 1188 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 TRIM67Q6ZTA4 783 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 C3orf62Q6ZUJ4 267 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 USP30Q70CQ3 517 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 DPPA4Q7L190 304 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 HDXQ7Z353 690 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 CACUL1Q86Y37 369 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 MPP5Q8N3R9 675 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 HDDC3Q8N4P3 179 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 GSDMBQ8TAX9 411 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 STYXQ8WUJ0 223 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 HMGB4Q8WW32 186 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 CDKL2Q92772 493 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 CLDN23Q96B33 292 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 ARRDC3Q96B67 414 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 ZNF669Q96BR6 464 aaPredicted RBP10.88□□□□□ -0.67
PFDN1-204ENST00000512707 ERLEC1Q96DZ1 483 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 RUFY1Q96T51 708 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 C19orf43Q9BQ61 176 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 CHRDQ9H2X0 955 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 ACBD3Q9H3P7 528 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 PCDH12Q9NPG4 1184 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 PPANQ9NQ55 473 aaKnown RBP10.88□□□□□ -0.67
PFDN1-204ENST00000512707 CHRAC1Q9NRG0 131 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 NINJ2Q9NZG7 142 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 B4GALT6Q9UBX8 382 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 SARDHQ9UL12 918 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 FZD4Q9ULV1 537 aa10.88□□□□□ -0.67
PFDN1-204ENST00000512707 MTF2Q9Y483 593 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms