RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 RAMP2O60895 175 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 ZNF821O75541 412 aaPredicted RBP7.28□□□□□ -1.24
USP46-208ENST00000512656 GFPT2O94808 682 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 PLEKP08567 350 aaPredicted RBP7.28□□□□□ -1.24
USP46-208ENST00000512656 KRT3P12035 628 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 FOSL1P15407 271 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 DESP17661 470 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 ITPKBP27987 946 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 PTPN9P43378 593 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 NSFP46459 744 aaKnown RBP7.28□□□□□ -1.24
USP46-208ENST00000512656 THOP1P52888 689 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 UCNP55089 124 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 ARF5P84085 180 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 SYCP1Q15431 976 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 CDO1Q16878 200 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 MYLK3Q32MK0 819 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 TBC1D25Q3MII6 688 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 C2CD6Q53TS8 623 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 ZNF805Q5CZA5 627 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 BROXQ5VW32 411 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 KDM7AQ6ZMT4 941 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 PARS2Q7L3T8 475 aaKnown RBP7.28□□□□□ -1.24
USP46-208ENST00000512656 GPR155Q7Z3F1 870 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 SLC22A18ASQ8N1D0 253 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 EMC1Q8N766 993 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 ZNF248Q8NDW4 579 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 ZNF548Q8NEK5 533 aaPredicted RBP7.28□□□□□ -1.24
USP46-208ENST00000512656 OR2AP1Q8NGE2 309 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 MAPK15Q8TD08 544 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 RXFP2Q8WXD0 754 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 CASKIN2Q8WXE0 1202 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 ARHGEF2Q92974 986 aaKnown RBP7.28□□□□□ -1.24
USP46-208ENST00000512656 BMFQ96LC9 184 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 APOLD1Q96LR9 279 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 GDAP1L1Q96MZ0 367 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 FCRL3Q96P31 734 aaPredicted RBP7.28□□□□□ -1.24
USP46-208ENST00000512656 LGMNQ99538 433 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 IL12RB2Q99665 862 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 TM6SF2Q9BZW4 377 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 PRORYQ9H606 182 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 GPR27Q9NS67 375 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 SAMSN1Q9NSI8 373 aaKnown RBP7.28□□□□□ -1.24
USP46-208ENST00000512656 DONSONQ9NYP3 566 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 SPASTQ9UBP0 616 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 NOCTQ9UK39 431 aaKnown RBP7.28□□□□□ -1.24
USP46-208ENST00000512656 SPTA1P02549 2419 aa7.28□□□□□ -1.24
USP46-208ENST00000512656 TRPM6Q9BX84 2022 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 CAPN8A6NHC0 703 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 C2CD4BA6NLJ0 364 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 TPP1O14773 563 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 BUB1O43683 1085 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 USP12O75317 370 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 CSO75390 466 aaKnown RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 NEBLO76041 1014 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 LRIG2O94898 1065 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 IGSF6O95976 241 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 B3GALT4O96024 378 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 CYP1A1P04798 512 aaPredicted RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 F13BP05160 661 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 CALB1P05937 261 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 UGT2B4P06133 528 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 GIMD1P0DJR0 217 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 XPAP23025 273 aaPredicted RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 SOX5P35711 763 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 ACVRL1P37023 503 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 STAT1P42224 750 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 LSSP48449 732 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 BLKP51451 505 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 SUOXP51687 545 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 YBEYP58557 167 aaPredicted RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 ERVPABLB-1P60509 514 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 POLR2FP61218 127 aaKnown RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 YPEL5P62699 121 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 CCDC173Q0VFZ6 552 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 PDE1CQ14123 709 aaPredicted RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 FZD2Q14332 565 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 GRM3Q14832 879 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 C15orf59Q2T9L4 293 aaPredicted RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 CCDC14Q49A88 953 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 INO80DQ53TQ3 878 aaPredicted RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 ZNF542PQ5EBM4 170 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 MANEALQ5VSG8 457 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 CDCP2Q5VXM1 449 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 TRNP1Q6NT89 227 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 GDPD4Q6W3E5 623 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 SLFN11Q7Z7L1 901 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 TTC7BQ86TV6 843 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 NLRP14Q86W24 1093 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 ZNF354CQ86Y25 554 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 SLC30A5Q8TAD4 765 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 WDR48Q8TAF3 677 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 ENOX1Q8TC92 643 aaKnown RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 IFI44Q8TCB0 444 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 CXorf40AQ8TE69 158 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 FAM172AQ8WUF8 416 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 SLC20A1Q8WUM9 679 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 CENPIQ92674 756 aaPredicted RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 NTAN1Q96AB6 310 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 CRELD1Q96HD1 420 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 TBATAQ96M53 351 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms