RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ZNF641Q96N77 438 aaPredicted RBP12.61□□□□□ -0.39
DDX41-215ENST00000512431 CRACR2AQ9BSW2 395 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 WDR26Q9H7D7 661 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 SUDS3Q9H7L9 328 aaPredicted RBP12.61□□□□□ -0.39
DDX41-215ENST00000512431 CARS2Q9HA77 564 aaKnown RBP12.61□□□□□ -0.39
DDX41-215ENST00000512431 PLCB1Q9NQ66 1216 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 APEX2Q9UBZ4 518 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 SDK2Q58EX2 2172 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 CHD5Q8TDI0 1954 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 TTLL8A6PVC2 850 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 INSIG1O15503 277 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 TEX33O43247 280 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 RECQL5O94762 991 aaPredicted RBP12.6□□□□□ -0.39
DDX41-215ENST00000512431 PIGNO95427 931 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 THRAP10827 490 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 GNLYP22749 145 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 ADRA1BP35368 520 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 FLT3P36888 993 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 GABRB2P47870 512 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 UQCRFS1P47985 274 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 MARSP56192 900 aaKnown RBP12.6□□□□□ -0.39
DDX41-215ENST00000512431 BPIFB4P59827 614 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 ATP11AP98196 1134 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 NRG1Q02297 640 aaPredicted RBP12.6□□□□□ -0.39
DDX41-215ENST00000512431 SQSTM1Q13501 440 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 SMYD5Q6GMV2 418 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 ISM2Q6H9L7 571 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 CAPRIN2Q6IMN6 1127 aaKnown RBP12.6□□□□□ -0.39
DDX41-215ENST00000512431 TTI2Q6NXR4 508 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 TMEM71Q6P5X7 295 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 NELFBQ8WX92 580 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 SHC3Q92529 594 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 TBC1D31Q96DN5 1066 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 RTP4Q96DX8 246 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 CUEDC1Q9NWM3 386 aaPredicted RBP12.6□□□□□ -0.39
DDX41-215ENST00000512431 TAAR2Q9P1P5 351 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 ATP8A1Q9Y2Q0 1164 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 KCNMB2Q9Y691 235 aa12.6□□□□□ -0.39
DDX41-215ENST00000512431 IGHV1OR21-1A0A087WYE8 117 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 GOLGA8SH3BPF8 625 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 FGFR1OPO95684 399 aaKnown RBP12.59□□□□□ -0.39
DDX41-215ENST00000512431 ELFN1P0C7U0 828 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 SLC9A1P19634 815 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 NR1D1P20393 614 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 TRIM23P36406 574 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 MMP12P39900 470 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 GPLD1P80108 840 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 MC2RQ01718 297 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 PNCKQ6P2M8 343 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 GBP6Q6ZN66 633 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 SLC47A2Q86VL8 602 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 XYLT1Q86Y38 959 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 CREBRFQ8IUR6 639 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 NETO2Q8NC67 525 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 EXOC2Q96KP1 924 aa12.59□□□□□ -0.39
DDX41-215ENST00000512431 TRNAU1APQ9NX07 287 aaKnown RBP12.59□□□□□ -0.39
DDX41-215ENST00000512431 LRP4O75096 1905 aa12.58□□□□□ -0.39
DDX41-215ENST00000512431 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 A1L4Q6 167 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 A8MU76 341 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 INPP4BO15327 924 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 STK17BO94768 372 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 LRIG2O94898 1065 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 DDAH2O95865 285 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
DDX41-215ENST00000512431 ERCC5P28715 1186 aaPredicted RBP12.58□□□□□ -0.4
DDX41-215ENST00000512431 YBEYP58557 167 aaPredicted RBP12.58□□□□□ -0.4
DDX41-215ENST00000512431 POLR2LP62875 67 aaKnown RBP12.58□□□□□ -0.4
DDX41-215ENST00000512431 CDO1Q16878 200 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 MANEALQ5VSG8 457 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 SLC30A9Q6PML9 568 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 BNIPLQ7Z465 357 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 FMR1NBQ8N0W7 255 aaPredicted RBP12.58□□□□□ -0.4
DDX41-215ENST00000512431 OR10G6Q8NH81 332 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 CPT1CQ8TCG5 803 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 TUBGCP5Q96RT8 1024 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 CTRCQ99895 268 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 LGR4Q9BXB1 951 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 SPRY4Q9C004 299 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 FBXO8Q9NRD0 319 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 PHPT1Q9NRX4 125 aaPredicted RBP12.58□□□□□ -0.4
DDX41-215ENST00000512431 CTNND2Q9UQB3 1225 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 DOCK4Q8N1I0 1966 aa12.58□□□□□ -0.4
DDX41-215ENST00000512431 NOTCH2Q04721 2471 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 PPM1DO15297 605 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 RFPL1O75677 317 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 PRKCGP05129 697 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 PLEKP08567 350 aaPredicted RBP12.57□□□□□ -0.4
DDX41-215ENST00000512431 MYCLP1P12525 358 aaPredicted RBP12.57□□□□□ -0.4
DDX41-215ENST00000512431 AK4P27144 223 aaPredicted RBP12.57□□□□□ -0.4
DDX41-215ENST00000512431 SERPINA4P29622 427 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 CLCN1P35523 988 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 GNPDA1P46926 289 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 ACOX1Q15067 660 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 EXOC3L4Q17RC7 722 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 SNAP47Q5SQN1 464 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 ATP1A1-AS1Q5TC04 95 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 LIPIQ6XZB0 460 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms