RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 GTF2H1P32780 548 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 MXI1P50539 228 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 MAP7Q14244 749 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 COBLL1Q53SF7 1204 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 SNAP47Q5SQN1 464 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 PAPD7Q5XG87 772 aaKnown RBP9.16□□□□□ -0.94
NUP54-211ENST00000512151 SLC6A19Q695T7 634 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 CEACAM20Q6UY09 585 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 ARHGAP22Q7Z5H3 698 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 TTC7BQ86TV6 843 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 ESX1Q8N693 406 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 RBMXL3Q8N7X1 1067 aaKnown RBP9.16□□□□□ -0.94
NUP54-211ENST00000512151 OR56A4Q8NGH8 313 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 ZDHHC1Q8WTX9 485 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 CCDC47Q96A33 483 aaKnown RBP9.16□□□□□ -0.94
NUP54-211ENST00000512151 SNRNP40Q96DI7 357 aaKnown RBP9.16□□□□□ -0.94
NUP54-211ENST00000512151 SPON2Q9BUD6 331 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 SLC25A23Q9BV35 468 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 C1QTNF7Q9BXJ2 289 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 SIK2Q9H0K1 926 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 POPDC2Q9HBU9 364 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 FBXO8Q9NRD0 319 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 ASF1BQ9NVP2 202 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 DDIT4Q9NX09 232 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 ZNF212Q9UDV6 495 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 KIAA1257Q9ULG3 409 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 ST14Q9Y5Y6 855 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 NIPBLQ6KC79 2804 aaeCLIP9.16□□□□□ -0.94
NUP54-211ENST00000512151 PIPSLA2A3N6 862 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 TRIM49BA6NDI0 452 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 ANKUB1A6NFN9 424 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 KRIT1O00522 736 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 FUCA1P04066 466 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 SLC2A3P11169 496 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 KRT13P13646 458 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 NR2F2P24468 414 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 CCR1P32246 355 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 GPD2P43304 727 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 GPR3P46089 330 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 PMS1P54277 932 aaKnown RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 YWHAZP63104 245 aaKnown RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 TYRO3Q06418 890 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 LRMPQ12912 555 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 TMEM52BQ4KMG9 183 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 CBWD6Q4V339 395 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 CBWD3Q5JTY5 395 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 CBWD5Q5RIA9 395 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 ATXN7L2Q5T6C5 722 aaPredicted RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 OTUD1Q5VV17 481 aaPredicted RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 DENND1BQ6P3S1 775 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 TMEM71Q6P5X7 295 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 TMEM270Q6UE05 265 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 SASS6Q6UVJ0 657 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 C11orf57Q6ZUT1 292 aaPredicted RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 SETD3Q86TU7 594 aaPredicted RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 ZNF761Q86XN6 746 aaPredicted RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 PELI3Q8N2H9 469 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 GUF1Q8N442 669 aaKnown RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 RYBPQ8N488 228 aaPredicted RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 GALNT6Q8NCL4 622 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 KIAA1524Q8TCG1 905 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 KAT5Q92993 513 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 RUFY1Q96T51 708 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 LGR4Q9BXB1 951 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 SUDS3Q9H7L9 328 aaPredicted RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 SLAMF7Q9NQ25 335 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 ST7Q9NRC1 585 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 TAAR2Q9P1P5 351 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 TRAF3IP3Q9Y228 551 aa9.15□□□□□ -0.94
NUP54-211ENST00000512151 PCDHGA9Q9Y5G4 932 aaKnown RBP9.15□□□□□ -0.94
NUP54-211ENST00000512151 DOCK4Q8N1I0 1966 aa9.15□□□□□ -0.95
NUP54-211ENST00000512151 A6NCN8 305 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 DRGXA6NNA5 263 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 E5RJQ4 531 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 PRSS44E7EML9 344 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 SART1O43290 800 aaKnown RBP9.14□□□□□ -0.95
NUP54-211ENST00000512151 CREG1O75629 220 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 LETM1O95202 739 aaPredicted RBP9.14□□□□□ -0.95
NUP54-211ENST00000512151 PAEPP09466 180 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 CCNB1P14635 433 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 NFKBIAP25963 317 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 AK4P27144 223 aaPredicted RBP9.14□□□□□ -0.95
NUP54-211ENST00000512151 HNRNPH3P31942 346 aaKnown RBP9.14□□□□□ -0.95
NUP54-211ENST00000512151 CCL11P51671 97 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 KIAA1024LP59773 190 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 CDK17Q00537 523 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 ENPEPQ07075 957 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 MTM1Q13496 603 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 ZRSR2Q15696 482 aaKnown RBP9.14□□□□□ -0.95
NUP54-211ENST00000512151 MYLK3Q32MK0 819 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 ZCWPW2Q504Y3 356 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 C6orf15Q6UXA7 325 aaPredicted RBP9.14□□□□□ -0.95
NUP54-211ENST00000512151 SPNS3Q6ZMD2 512 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 LEKR1Q6ZMV7 388 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 DEFB106AQ8N104 65 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 NAGSQ8N159 534 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 CISD2Q8N5K1 135 aaKnown RBP9.14□□□□□ -0.95
NUP54-211ENST00000512151 NETO2Q8NC67 525 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 ATL2Q8NHH9 583 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 PTCD2Q8WV60 388 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms