RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LHCGRP22888 699 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PAX3P23760 479 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CFPP27918 469 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 EPHA2P29317 976 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SERPINB6P35237 376 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAN2A2P49641 1150 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 HNMTP50135 292 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SERPINH1P50454 418 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANXA11P50995 505 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PLTPP55058 493 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDH13P55290 713 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 IL1RL1Q01638 556 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TAP1Q03518 808 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CACNB2Q08289 660 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MYBPC2Q14324 1141 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIP4Q15650 581 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZYXQ15942 572 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF394Q53GI3 561 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DCAF15Q66K64 600 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIM68Q6AZZ1 485 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC25A24Q6NUK1 477 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PPP1R2P3Q6NXS1 205 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 FBXO42Q6P3S6 717 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DCUN1D2Q6PH85 259 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RAPH1Q70E73 1250 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTSS1LQ765P7 747 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGAP12Q8IWW6 846 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM86B1Q8N7N1 296 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MFSD2AQ8NA29 543 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 OR13F1Q8NGS4 319 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RNASE11Q8TAA1 199 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM76AQ8TAV0 307 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC26A7Q8TE54 656 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SH3KBP1Q96B97 665 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 NACC2Q96BF6 587 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SENP5Q96HI0 755 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PLEKHA8Q96JA3 519 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAML3Q96JK9 1138 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CLMNQ96JQ2 1002 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM20AQ96MK3 541 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIB3Q96RU7 358 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 REEP2Q9BRK0 252 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PDCD10Q9BUL8 212 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCDC90BQ9GZT6 254 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PDFQ9HBH1 243 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIM36Q9NQ86 728 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TREX1Q9NSU2 369 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 GID8Q9NWU2 228 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ERAP1Q9NZ08 941 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 GGA3Q9NZ52 723 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TBC1D24Q9ULP9 559 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ACOT9Q9Y305 439 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 GPC6Q9Y625 555 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SEC16AO15027 2179 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 LCHNA4D1U4 455 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CFAP73A6NFT4 308 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CFAP99D6REC4 459 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DVL2O14641 736 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PDCD5O14737 125 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 FZD6O60353 706 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDC40O60508 579 aaKnown RBP eCLIP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 KPNA6O60684 536 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 HIP1RO75146 1068 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 IDH1O75874 414 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SEC14L2O76054 403 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 UFL1O94874 794 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TGDSO95455 350 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 STAU1O95793 577 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT19P08727 400 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ACADSP16219 412 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ABCB4P21439 1286 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAN1A1P33908 653 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCK1P35558 622 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARL2P36404 184 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAP3K8P41279 467 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RARRES1P49788 294 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 AGFG1P52594 562 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 IST1P53990 364 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CRISP3P54108 245 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SESN2P58004 480 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TNNC1P63316 161 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DCDP81605 110 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MRPS35P82673 323 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SRSF11Q05519 484 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RUNX1T1Q06455 604 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PPIDQ08752 370 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTA1Q13330 715 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PDCD4Q53EL6 469 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 HP1BP3Q5SSJ5 553 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF549Q6P9A3 640 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRMT10BQ6PF06 316 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PEG10Q86TG7 708 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CEP57Q86XR8 500 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RHPN2Q8IUC4 686 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RAVER1Q8IY67 606 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC44A3Q8N4M1 653 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PNPLA1Q8N8W4 532 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MGARPQ8TDB4 240 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DNASE2BQ8WZ79 361 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RAD54LQ92698 747 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms