RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 BMPERQ8N8U9 685 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 CASKIN2Q8WXE0 1202 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 FAM81BQ96LP2 452 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 CEP63Q96MT8 703 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 GSDMCQ9BYG8 508 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 SYNCQ9H7C4 482 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 CYP4F12Q9HCS2 524 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 FGF22Q9HCT0 170 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 ACP6Q9NPH0 428 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 FBXO8Q9NRD0 319 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 PDP2Q9P2J9 529 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 IGHV1OR21-1A0A087WYE8 117 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 GOLGA6L4A6NEF3 574 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 KDELR3O43731 214 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 ECEL1O95672 775 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 IGSF6O95976 241 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 ERBB2P04626 1255 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 RNF224P0DH78 156 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 TFE3P19532 575 aaPredicted RBP11.61□□□□□ -0.55
RNF4-216ENST00000511859 COL8A1P27658 744 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 MAPKAPK2P49137 400 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 GPLD1P80108 840 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 RAPGEF1Q13905 1077 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 GRM3Q14832 879 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 CCDC40Q4G0X9 1142 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 INO80DQ53TQ3 878 aaPredicted RBP11.61□□□□□ -0.55
RNF4-216ENST00000511859 NKAIN2Q5VXU1 208 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 ESX1Q8N693 406 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 PLA2G15Q8NCC3 412 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 TBCBQ99426 244 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 PCDH12Q9NPG4 1184 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 MOSPD1Q9UJG1 213 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 POLHQ9Y253 713 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 F8P00451 2351 aa11.61□□□□□ -0.55
RNF4-216ENST00000511859 PRSS38A1L453 326 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 TRIM49BA6NDI0 452 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 WIPF3A6NGB9 483 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 PPM1DO15297 605 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 BUB1O43683 1085 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 RFPL1O75677 317 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 STK17BO94768 372 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 ZNF202O95125 648 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 BMP6P22004 513 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 MPSTP25325 297 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 ILF3Q12906 894 aaKnown RBP eCLIP11.6□□□□□ -0.55
RNF4-216ENST00000511859 MAP7Q14244 749 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 ATP1A1-AS1Q5TC04 95 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 SMYD5Q6GMV2 418 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 NRROSQ86YC3 692 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 GBP4Q96PP9 640 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 GOLPH3LQ9H4A5 285 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 SUV39H2Q9H5I1 410 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 NDFIP2Q9NV92 336 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 TMEM248Q9NWD8 314 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 TRNAU1APQ9NX07 287 aaKnown RBP11.6□□□□□ -0.55
RNF4-216ENST00000511859 TAAR2Q9P1P5 351 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 OR12D3Q9UGF7 316 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 DNAI1Q9UI46 699 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 TLK1Q9UKI8 766 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 MAP4K5Q9Y4K4 846 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 OTOGQ6ZRI0 2925 aa11.6□□□□□ -0.55
RNF4-216ENST00000511859 TNRC6AQ8NDV7 1962 aaKnown RBP11.6□□□□□ -0.55
RNF4-216ENST00000511859 DIDO1Q9BTC0 2240 aaKnown RBP11.59□□□□□ -0.55
RNF4-216ENST00000511859 TSPAN11A1L157 253 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 INPP4BO15327 924 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 TMCC1O94876 653 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 RECKO95980 971 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 RHOQP17081 205 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 KRT9P35527 623 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 SCNN1AP37088 669 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 STAT5AP42229 794 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 RHOAP61586 193 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 NRG1Q02297 640 aaPredicted RBP11.59□□□□□ -0.55
RNF4-216ENST00000511859 PTPN20Q4JDL3 420 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 BRAT1Q6PJG6 821 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 LEKR1Q6ZMV7 388 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 ARHGAP22Q7Z5H3 698 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 NLRP14Q86W24 1093 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 PASD1Q8IV76 773 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 AHCYL2Q96HN2 611 aaKnown RBP11.59□□□□□ -0.55
RNF4-216ENST00000511859 ZNF641Q96N77 438 aaPredicted RBP11.59□□□□□ -0.55
RNF4-216ENST00000511859 GSDMAQ96QA5 445 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 NCAPGQ9BPX3 1015 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 CASS4Q9NQ75 786 aa11.59□□□□□ -0.55
RNF4-216ENST00000511859 RAMP2O60895 175 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 RECQL5O94762 991 aaPredicted RBP11.58□□□□□ -0.56
RNF4-216ENST00000511859 CLDN1O95832 211 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 VARSP26640 1264 aaKnown RBP11.58□□□□□ -0.56
RNF4-216ENST00000511859 CSF2RBP32927 897 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 MMP12P39900 470 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 USP8P40818 1118 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 PTK2Q05397 1052 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 CFAP58Q5T655 872 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 RWDD4Q6NW29 188 aaKnown RBP11.58□□□□□ -0.56
RNF4-216ENST00000511859 PNCKQ6P2M8 343 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 BNIPLQ7Z465 357 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 DNAAF5Q86Y56 855 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 APLFQ8IW19 511 aaPredicted RBP11.58□□□□□ -0.56
RNF4-216ENST00000511859 SLC34A3Q8N130 599 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 NAGSQ8N159 534 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms