RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SLC25A12O75746 678 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 LDHCP07864 332 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 CLTBP09497 229 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 HOXB2P14652 356 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZNF182P17025 639 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 ALOX12P18054 663 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 CD58P19256 250 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 AGAP20933 346 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 GNLYP22749 145 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 BDNFP23560 247 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 CHATP28329 748 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 RPL3P39023 403 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 HADHAP40939 763 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 PIK3CAP42336 1068 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 RFX5P48382 616 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 PRAMEP78395 509 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 ST3GAL1Q11201 340 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 PRKG2Q13237 762 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 CTTNQ14247 550 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 CRYMQ14894 314 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZNF260Q3ZCT1 412 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 MMEL1Q495T6 779 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 RILPL1Q5EBL4 403 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 SGO1Q5FBB7 561 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 HIST2H2BCQ6DN03 193 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 HIST2H2BDQ6DRA6 164 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 QSOX2Q6ZRP7 698 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 SHFQ7M4L6 423 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 CREB3L4Q8TEY5 395 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 ASB5Q8WWX0 329 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 SNAPC3Q92966 411 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 TXNDC15Q96J42 360 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 C1orf74Q96LT6 269 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 TMEM68Q96MH6 324 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 FCRL4Q96PJ5 515 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 SLITRK1Q96PX8 696 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 TMEM47Q9BQJ4 181 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 SF3B5Q9BWJ5 86 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 GHITMQ9H3K2 345 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 CLK4Q9HAZ1 481 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 RANGRFQ9HD47 186 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 DDX4Q9NQI0 724 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 HIF1ANQ9NWT6 349 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 TERF2IPQ9NYB0 399 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 IL36RNQ9UBH0 155 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 ADD3Q9UEY8 706 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 TBC1D29Q9UFV1 150 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 SWAP70Q9UH65 585 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 VPS28Q9UK41 221 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 RCOR1Q9UKL0 485 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 GPR34Q9UPC5 381 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 NFE2L3Q9Y4A8 694 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 RAI2Q9Y5P3 530 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 CEPT1Q9Y6K0 416 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 A0A1B0GVM2 712 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 INAFM1C9JVW0 142 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 TAF4O00268 1085 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 VILLO15195 856 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 RGS14O43566 566 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 NDUFS3O75489 264 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 LCATP04180 440 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 ITGB6P18564 788 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 CDH2P19022 906 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 GPTP24298 496 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 MCM3P25205 808 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 RFX2P48378 723 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 NUDT6P53370 316 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 MC1RQ01726 317 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 ROR2Q01974 943 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 NIPAL4Q0D2K0 466 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 GPS2Q13227 327 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 HNF4GQ14541 408 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 NAB2Q15742 525 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 MEA1Q16626 185 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 C2orf68Q2NKX9 166 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 USP41Q3LFD5 358 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 CXorf66Q5JRM2 361 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 C6orf141Q5SZD1 244 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 SPATA1Q5VX52 437 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 SARM1Q6SZW1 724 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 LINGO2Q7L985 606 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 TEX11Q8IYF3 940 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 DSELQ8IZU8 1212 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 C17orf53Q8N3J3 647 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 AGBL3Q8NEM8 1001 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 OR14L1PQ8NHC6 308 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 HARBI1Q96MB7 349 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZNF48Q96MX3 618 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 FAM110AQ9BQ89 295 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 MAK16Q9BXY0 300 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 IFIH1Q9BYX4 1025 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 ABI3Q9P2A4 366 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 MTMR6Q9Y217 621 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 R3HDM2Q9Y2K5 976 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 MAU2Q9Y6X3 613 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 TTC3P53804 2025 aa3.49□□□□□ -1.85
TRAPPC11-207ENST00000511409 RSF1Q96T23 1441 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 A0A1W2PQF6 199 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 MYMKA6NI61 221 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 BTBD18B2RXH4 712 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms