RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 PIGGQ5H8A4 983 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 SH3D19Q5HYK7 790 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 SH2D5Q6ZV89 423 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 KCTD8Q6ZWB6 473 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 CEP97Q8IW35 865 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 RPL10LQ96L21 214 aaKnown RBP14.92□□□□□ -0.02
USP38-202ENST00000510377 SNX27Q96L92 541 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 TBATAQ96M53 351 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 PPP2R3BQ9Y5P8 575 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 A8MT66 165 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 SDHDO14521 159 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 TRPC1P48995 793 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 CDC42EP1Q00587 391 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 SREBF2Q12772 1141 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 FAM98BQ52LJ0 330 aaKnown RBP14.92□□□□□ -0.02
USP38-202ENST00000510377 EGFLAMQ63HQ2 1017 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 STEAP4Q687X5 459 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 TAC4Q86UU9 113 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 PIM3Q86V86 326 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 ERI1Q8IV48 349 aaKnown RBP14.92□□□□□ -0.02
USP38-202ENST00000510377 ABI1Q8IZP0 508 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 ZCCHC7Q8N3Z6 543 aaKnown RBP14.92□□□□□ -0.02
USP38-202ENST00000510377 TWIST2Q8WVJ9 160 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 UXTQ9UBK9 157 aaPredicted RBP14.92□□□□□ -0.02
USP38-202ENST00000510377 ATP11BQ9Y2G3 1177 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 RBMX2Q9Y388 322 aaKnown RBP14.92□□□□□ -0.02
USP38-202ENST00000510377 TCAF1Q9Y4C2 921 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 PTGDR2Q9Y5Y4 395 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 HTRA2O43464 458 aaPredicted RBP14.92□□□□□ -0.02
USP38-202ENST00000510377 PAGE1O75459 146 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 GNA12Q03113 381 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 PRKCQQ04759 706 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 GALNT3Q14435 633 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 CARTPTQ16568 116 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 CHSY3Q70JA7 882 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 MYLPFQ96A32 169 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 C12orf43Q96C57 262 aaKnown RBP14.92□□□□□ -0.02
USP38-202ENST00000510377 TXNRD2Q9NNW7 524 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 DDX28Q9NUL7 540 aaKnown RBP14.92□□□□□ -0.02
USP38-202ENST00000510377 SH3GLB1Q9Y371 365 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 NHSQ6T4R5 1651 aa14.92□□□□□ -0.02
USP38-202ENST00000510377 A0A1B0GTW7 788 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 LINC00854A0A1B0GVQ3 168 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 TOR1BO14657 336 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 ODC1P11926 461 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 COL6A2P12110 1019 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 HK2P52789 917 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 RGS21Q2M5E4 152 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 PTRHD1Q6GMV3 140 aaKnown RBP14.91□□□□□ -0.02
USP38-202ENST00000510377 CENPLQ8N0S6 344 aaPredicted RBP14.91□□□□□ -0.02
USP38-202ENST00000510377 LILRA2Q8N149 483 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 SFRP1Q8N474 314 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 PCED1BQ96HM7 432 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 SEPT5Q99719 369 aaPredicted RBP14.91□□□□□ -0.02
USP38-202ENST00000510377 TRIM62Q9BVG3 475 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 FANCEQ9HB96 536 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 ZDHHC7Q9NXF8 308 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 PCDHGB4Q9UN71 923 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 PCDHGB5Q9Y5G0 923 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 A0A0J9YVX5 310 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 STX7O15400 261 aaKnown RBP14.91□□□□□ -0.02
USP38-202ENST00000510377 GRID2O43424 1007 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 SLC35E2BP0CK96 405 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 BRCC3P46736 316 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 SERPINB10P48595 397 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 LIPEQ05469 1076 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 IL27RAQ6UWB1 636 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 BNIPLQ7Z465 357 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 STYXQ8WUJ0 223 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 CEP19Q96LK0 163 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 MLPHQ9BV36 600 aaPredicted RBP14.91□□□□□ -0.02
USP38-202ENST00000510377 SENP6Q9GZR1 1112 aaPredicted RBP14.91□□□□□ -0.02
USP38-202ENST00000510377 CXCL16Q9H2A7 254 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 CDC14AQ9UNH5 594 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 AGRPO00253 132 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 DENRO43583 198 aaKnown RBP14.91□□□□□ -0.02
USP38-202ENST00000510377 ADSLP30566 484 aaPredicted RBP14.91□□□□□ -0.02
USP38-202ENST00000510377 SERPINB1P30740 379 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 ARRB2P32121 409 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 DAOAP59103 153 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 DSC2Q02487 901 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 HNRNPDQ14103 355 aaKnown RBP14.91□□□□□ -0.02
USP38-202ENST00000510377 CLEC20AQ6ZU45 233 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 CNGB3Q9NQW8 809 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 MTMR10Q9NXD2 777 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.91□□□□□ -0.02
USP38-202ENST00000510377 SLC30A1Q9Y6M5 507 aa14.91□□□□□ -0.02
USP38-202ENST00000510377 PRORSD1PA6NEY8 169 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 H3BNX3 289 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 ALDH1A2O94788 518 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 KCNH1O95259 989 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 DLGAP3O95886 979 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 ALDH4A1P30038 563 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 MERTKQ12866 999 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 SPIDRQ14159 915 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 MYBPC3Q14896 1274 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 OSTM1Q86WC4 334 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 GRIN3AQ8TCU5 1115 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 DQX1Q8TE96 717 aaKnown RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 BORCS5Q969J3 196 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms