RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 COQ10AQ96MF6 247 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 ZNF830Q96NB3 372 aaPredicted RBP13.61□□□□□ -0.23
SNF8-206ENST00000509989 GORASP1Q9BQQ3 440 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 LGR4Q9BXB1 951 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 OSBPL8Q9BZF1 889 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 ERVMER34-1Q9H9K5 563 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 CD84Q9UIB8 345 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 TPX2Q9ULW0 747 aaKnown RBP13.61□□□□□ -0.23
SNF8-206ENST00000509989 WASF3Q9UPY6 502 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 R3HDM2Q9Y2K5 976 aaKnown RBP13.61□□□□□ -0.23
SNF8-206ENST00000509989 OR1A2Q9Y585 309 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 ASXL3Q9C0F0 2248 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 ARHGEF17Q96PE2 2063 aaPredicted RBP13.6□□□□□ -0.23
SNF8-206ENST00000509989 ZFC3H1O60293 1989 aaKnown RBP13.6□□□□□ -0.23
SNF8-206ENST00000509989 SPTY2D1-AS1A0A0U1RR47 76 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 CASC3O15234 703 aaKnown RBP13.6□□□□□ -0.23
SNF8-206ENST00000509989 HEXIM1O94992 359 aaKnown RBP13.6□□□□□ -0.23
SNF8-206ENST00000509989 C1SP09871 688 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 ELFN1P0C7U0 828 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 PIRTP0C851 137 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 ZFXP17010 805 aaPredicted RBP13.6□□□□□ -0.23
SNF8-206ENST00000509989 NFKB1P19838 968 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 TGM2P21980 687 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 RBL1P28749 1068 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 VIPR1P32241 457 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 ETV3P41162 512 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 OTUD4Q01804 1114 aaKnown RBP13.6□□□□□ -0.23
SNF8-206ENST00000509989 FOXC1Q12948 553 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 C1orf61Q13536 156 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 TFDP2Q14188 446 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 GALNT3Q14435 633 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 LRRC14Q15048 493 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 ACOX1Q15067 660 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 CDKN3Q16667 212 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 QPCTQ16769 361 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 ARMC12Q5T9G4 340 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 Q6ZVL8 140 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 PEX26Q7Z412 305 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 COL27A1Q8IZC6 1860 aaPredicted RBP13.6□□□□□ -0.23
SNF8-206ENST00000509989 DENND6BQ8NEG7 585 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 LPCAT1Q8NF37 534 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 SPOCK2Q92563 424 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 TADA1Q96BN2 335 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 EID2BQ96D98 161 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 RBM41Q96IZ5 413 aaKnown RBP13.6□□□□□ -0.23
SNF8-206ENST00000509989 MCCC1Q96RQ3 725 aaPredicted RBP13.6□□□□□ -0.23
SNF8-206ENST00000509989 TRIB3Q96RU7 358 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 AGAP2Q99490 1192 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 DNAJC28Q9NX36 388 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 AMFRQ9UKV5 643 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 PHTF1Q9UMS5 762 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 PPIL1Q9Y3C6 166 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 PCDHGB2Q9Y5G2 931 aa13.6□□□□□ -0.23
SNF8-206ENST00000509989 RP1P56715 2156 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 A0A0J9YYE9 177 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 CCDC66A2RUB6 948 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 PPP1R12AO14974 1030 aaPredicted RBP13.59□□□□□ -0.23
SNF8-206ENST00000509989 FFAR2O15552 330 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 FLRT2O43155 660 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 ARHGAP6O43182 974 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 PIAS2O75928 621 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 CLDN7O95471 211 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 TRBC1P01850 177 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 ITGAVP06756 1048 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 DGKAP23743 735 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 PMLP29590 882 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 SUOXP51687 545 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 RWDD2BP57060 319 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 PTSQ03393 145 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 OVGP1Q12889 678 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 OLIG2Q13516 323 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 AGERQ15109 404 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 PCSK7Q16549 785 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 TEX44Q53QW1 395 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 LRRC66Q68CR7 880 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 MICALCLQ6ZW33 695 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 ZNF567Q8N184 647 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 CHCHD4Q8N4Q1 142 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 TFB1MQ8WVM0 346 aaKnown RBP13.59□□□□□ -0.23
SNF8-206ENST00000509989 P3H4Q92791 437 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 TSACCQ96A04 125 aaPredicted RBP13.59□□□□□ -0.23
SNF8-206ENST00000509989 SCRN2Q96FV2 425 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 IMP4Q96G21 291 aaKnown RBP13.59□□□□□ -0.23
SNF8-206ENST00000509989 OXNAD1Q96HP4 312 aaPredicted RBP13.59□□□□□ -0.23
SNF8-206ENST00000509989 HES6Q96HZ4 224 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 TEKT5Q96M29 485 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 QKIQ96PU8 341 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNF8-206ENST00000509989 APOOQ9BUR5 198 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 KCNF1Q9H3M0 494 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 SLC32A1Q9H598 525 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 GLOD4Q9HC38 313 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 PCDH9Q9HC56 1237 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 LZTFL1Q9NQ48 299 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 MRPL40Q9NQ50 206 aaKnown RBP13.59□□□□□ -0.23
SNF8-206ENST00000509989 CHD8Q9HCK8 2581 aa13.59□□□□□ -0.23
SNF8-206ENST00000509989 FRYQ5TBA9 3013 aa13.58□□□□□ -0.23
SNF8-206ENST00000509989 TMEM202A6NGA9 273 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 HYAL3O43820 417 aaPredicted RBP13.58□□□□□ -0.24
SNF8-206ENST00000509989 PMPCBO75439 489 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 GCATO75600 419 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms