RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 MFSD1Q9H3U5 465 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 VWA7Q9Y334 891 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 KIAA0355O15063 1070 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 ZMPSTE24O75844 475 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 KLHL2O95198 593 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 JUNP05412 331 aaKnown RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 CD1EP15812 388 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 EN2P19622 333 aaPredicted RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 FMO4P31512 558 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 IDH3AP50213 366 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 NTHL1P78549 312 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 PDCD2Q16342 344 aaPredicted RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 ZNF549Q6P9A3 640 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 ZYG11AQ6WRX3 759 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 OR4L1Q8NH43 312 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 CDKN2AIPNLQ96HQ2 116 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 MARK4Q96L34 752 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 RANBP9Q96S59 729 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 SLC46A2Q9BY10 475 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 NUF2Q9BZD4 464 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 POMKQ9H5K3 350 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 IL23AQ9NPF7 189 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 IGSF5Q9NSI5 407 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 CATSPERZQ9NTU4 200 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 TMEM51Q9NW97 253 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 EVLQ9UI08 416 aaPredicted RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 FKBPLQ9UIM3 349 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 REV3LO60673 3130 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 PER2O15055 1255 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 SLC7A4O43246 635 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 RPP40O75818 363 aaKnown RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 IL1BP01584 269 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 LINC00271P0C7V0 271 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 CR2P20023 1033 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 CD70P32970 193 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 STK19P49842 368 aaPredicted RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 MXRA7P84157 204 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 ACBD5Q5T8D3 534 aaPredicted RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 LIPMQ5VYY2 423 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 CHST9Q7L1S5 443 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 TMC8Q8IU68 726 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 HJURPQ8NCD3 748 aaPredicted RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 RIN3Q8TB24 985 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 POLR3BQ9NW08 1133 aaPredicted RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 APOBEC2Q9Y235 224 aaKnown RBP14.92□□□□□ -0.02
PHF3-209ENST00000509330 ANKRD6Q9Y2G4 727 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 MYOFQ9NZM1 2061 aa14.92□□□□□ -0.02
PHF3-209ENST00000509330 LOC100653049A0A140TA62 436 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 GYG2O15488 501 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 TLL1O43897 1013 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 MGRN1O60291 552 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 KRT34O76011 436 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 EPHA3P29320 983 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 CRABP2P29373 138 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 IRS1P35568 1242 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 CTSOP43234 321 aaPredicted RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 POU4F1Q01851 419 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 PABPC1LQ4VXU2 614 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 RBM23Q86U06 439 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 STYXQ8WUJ0 223 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 SREK1Q8WXA9 508 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 PTCD3Q96EY7 689 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 TMEM106CQ9BVX2 250 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 PRKAG2Q9UGJ0 569 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 ZDHHC2Q9UIJ5 367 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 LSM7Q9UK45 103 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 H0Y3Z8 333 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 OR1I1O60431 355 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 TFEBP19484 476 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 HADHAP40939 763 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 SKIV2L2P42285 1042 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 CSRP3P50461 194 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 ZRANB3Q5FWF4 1079 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 CEP295NLQ96MC4 621 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 OR52B2Q96RD2 323 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 DDX50Q9BQ39 737 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 C17orf80Q9BSJ5 609 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 CADM1Q9BY67 442 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 MRPL46Q9H2W6 279 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 GTSE1Q9NYZ3 720 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 HSFX1Q9UBD0 423 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 B2RBV5 119 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 ZBTB14O43829 449 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 SIN3BO75182 1162 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 SKAP2O75563 359 aaPredicted RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 PAPSS2O95340 614 aaPredicted RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 ADH1AP07327 375 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 PTPN4P29074 926 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 KCNC1P48547 511 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 CLCN5P51795 746 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 CBX2Q14781 532 aaPredicted RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 LRRC73Q5JTD7 316 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 NXNQ6DKJ4 435 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 PSAPL1Q6NUJ1 521 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 POF1BQ8WVV4 589 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 ING5Q8WYH8 240 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 SARS2Q9NP81 518 aaKnown RBP14.91□□□□□ -0.02
PHF3-209ENST00000509330 ASAH2Q9NR71 780 aa14.91□□□□□ -0.02
PHF3-209ENST00000509330 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.91□□□□□ -0.02
PHF3-209ENST00000509330 LHX3Q9UBR4 397 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms