RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 GFM1Q96RP9 751 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 TCEAL2Q9H3H9 227 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 WDR26Q9H7D7 661 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 PHPT1Q9NRX4 125 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 DNPEPQ9ULA0 475 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 SATB2Q9UPW6 733 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 OR1A2Q9Y585 309 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 ENTPD2Q9Y5L3 495 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 BAHCC1Q9P281 2608 aa13.65□□□□□ -0.22
CCHCR1-227ENST00000508852 BPTFQ12830 3046 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 NTN3O00634 580 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 CPP00450 1065 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 GLB1P16278 677 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 CA4P22748 312 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 TEAD1P28347 426 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 VIPR1P32241 457 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 RGRP47804 291 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 UBASH3AP57075 661 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 RHDQ02161 417 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 C19orf57Q0VDD7 668 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 KRT81Q14533 505 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 ACOX1Q15067 660 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 C3orf38Q5JPI3 329 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 PERM1Q5SV97 790 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 TIGD7Q6NT04 549 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 PNCKQ6P2M8 343 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 TAF8Q7Z7C8 310 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 MAP7D3Q8IWC1 876 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 RAVER1Q8IY67 606 aaKnown RBP13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 NPWQ8N729 165 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 PCDH19Q8TAB3 1148 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 HSPH1Q92598 858 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 CSPG4P5Q96PW8 444 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 MGME1Q9BQP7 344 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 ASCL3Q9NQ33 180 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 AMACRQ9UHK6 382 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 APPL1Q9UKG1 709 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 CAPN11Q9UMQ6 739 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 LUC7L2Q9Y383 392 aaKnown RBP13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 PTPRQQ9UMZ3 2332 aa13.64□□□□□ -0.23
CCHCR1-227ENST00000508852 ERVH48-1M5A8F1 160 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 MAFKO60675 156 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 ITGA2BP08514 1039 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 RARAP10276 462 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 MYCLP1P12525 358 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 SKILP12757 684 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 CR2P20023 1033 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 MMP13P45452 471 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 FANCCQ00597 558 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 SLC10A7Q0GE19 358 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 RALGDSQ12967 914 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 ARHGEF7Q14155 803 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 CLPPQ16740 277 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 CCDC122Q5T0U0 273 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 ARMC12Q5T9G4 340 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 OGFOD3Q6PK18 319 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 USP45Q70EL2 814 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 ZSWIM9Q86XI8 627 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 KYQ8NBH2 561 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 GPR156Q8NFN8 814 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 FATE1Q969F0 183 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 FUBP1Q96AE4 644 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 NUS1Q96E22 293 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 SCRN2Q96FV2 425 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 ATXN7L3BQ96GX2 97 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 FUCA2Q9BTY2 467 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 TRIM7Q9C029 511 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 ANAPC7Q9UJX3 599 aa13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 PNMA8BQ9ULN7 279 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-227ENST00000508852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.63□□□□□ -0.236e-8■□□□□ 9.4
CCHCR1-227ENST00000508852 FASNP49327 2511 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 COL27A1Q8IZC6 1860 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 NUDT21O43809 227 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 CYP1A2P05177 515 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 AMPD1P23109 780 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 IL1R2P27930 398 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 CCKBRP32239 447 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 INHBCP55103 352 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 CXADRP78310 365 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 PDK2Q15119 407 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 NFKBIBQ15653 356 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 SMTNL2Q2TAL5 461 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 E4F1Q66K89 784 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 HGSNATQ68CP4 663 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 ALKBH5Q6P6C2 394 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 ARHGAP36Q6ZRI8 547 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 CLEC14AQ86T13 490 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 NLRP8Q86W28 1048 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 FAM46DQ8NEK8 389 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 PDCD6IPQ8WUM4 868 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 SLC39A7Q92504 469 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 CCDC74AQ96AQ1 378 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 COQ10AQ96MF6 247 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 ANP32EQ9BTT0 268 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 NUP85Q9BW27 656 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 GSDMCQ9BYG8 508 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 POLR1EQ9GZS1 481 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 LRRN3Q9H3W5 708 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms