RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 FAM204AQ9H8W3 233 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 SGK2Q9HBY8 427 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 CSNK1G1Q9HCP0 422 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 CNGB3Q9NQW8 809 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ITM2CQ9NQX7 267 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 GDF3Q9NR23 364 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TM7SF3Q9NS93 570 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 RXFP3Q9NSD7 469 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ABCB8Q9NUT2 735 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TMEM51Q9NW97 253 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 EIF2B4Q9UI10 523 aaKnown RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 IPO11Q9UI26 975 aaKnown RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 MCM8Q9UJA3 840 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 GGA2Q9UJY4 613 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 RCOR1Q9UKL0 485 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TSPAN16Q9UKR8 245 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 AGO1Q9UL18 857 aaKnown RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TRAF3IP3Q9Y228 551 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 SLC27A6Q9Y2P4 619 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 NFE2L3Q9Y4A8 694 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 FANCMQ8IYD8 2048 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 SCN1AP35498 2009 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 NOTCH4Q99466 2003 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 USP34Q70CQ2 3546 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 SYNJ2BP-COX16A0A087WUM0 186 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 EDDM13A0A1B0GTR0 161 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 A0A1B0GVT2 93 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CAPN8A6NHC0 703 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CDX4O14627 284 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 THAP12O43422 761 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 TNFSF14O43557 240 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 SH3BP5O60239 455 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 KDM1AO60341 852 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ULK1O75385 1050 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 BEST1O76090 585 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 RHOBTB3O94955 611 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 LUC7L3O95232 432 aaKnown RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 LDOC1O95751 146 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 IL1BP01584 269 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 PAEPP09466 180 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 DLDP09622 509 aaKnown RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZDHHC11BP0C7U3 371 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 FTH1P19P0C7X4 201 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF883P0CG24 379 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 HLA-EP13747 358 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 XPAP23025 273 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CD27P26842 260 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 APEX1P27695 318 aaKnown RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 KRT9P35527 623 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 NUDT1P36639 197 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 IL12RB1P42701 662 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 PPM1FP49593 454 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 RGS7P49802 495 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 NDUFA8P51970 172 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CACNA2D1P54289 1103 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 MFAP3P55082 362 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 KRT83P78385 493 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CDK17Q00537 523 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CD83Q01151 205 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 SEMA3BQ13214 749 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF177Q13360 481 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 BIRC2Q13490 618 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 MYBPC3Q14896 1274 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ACAP1Q15027 740 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 HLA-BQ31612 363 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CFAP58Q5T655 872 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF658Q5TYW1 1059 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 BSPRYQ5W0U4 402 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 KANK2Q63ZY3 851 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ARHGAP17Q68EM7 881 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 TIGD7Q6NT04 549 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 TOGARAM2Q6ZUX3 1019 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ENOSF1Q7L5Y1 443 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 LIMS2Q7Z4I7 341 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CHSY1Q86X52 802 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 FAM114A1Q8IWE2 563 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 RYBPQ8N488 228 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF610Q8N9Z0 462 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CLRN3Q8NCR9 226 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 KIAA0895Q8NCT3 520 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ANKRD20A12PQ8NF67 263 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 OR14C36Q8NHC7 312 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CXorf38Q8TB03 319 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 UBA3Q8TBC4 463 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 OR8D1Q8WZ84 308 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 IRGQQ8WZA9 623 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF419Q96HQ0 510 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 DHTKD1Q96HY7 919 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 PPP1R16AQ96I34 528 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 KRTAP4-5Q9BYR2 181 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ULBP1Q9BZM6 244 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 XYLT2Q9H1B5 865 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 TMEM74BQ9NUR3 256 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 FBXL12Q9NXK8 326 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 WSB2Q9NYS7 404 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 COX16Q9P0S2 106 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 THAP10Q9P2Z0 257 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 CDC42EP3Q9UKI2 254 aa3.87□□□□□ -1.79
HMGN1P11-201ENST00000508668 ANKRD6Q9Y2G4 727 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms