RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 TRIM74Q86UV6 250 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 TRIM73Q86UV7 250 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 MYPOPQ86VE0 399 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 KLHDC8BQ8IXV7 354 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 LINS1Q8NG48 757 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 NOC3LQ8WTT2 800 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 RNF125Q96EQ8 232 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 TWSG1Q9GZX9 223 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 CCDC68Q9H2F9 335 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 EVA1AQ9H8M9 152 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 VEZTQ9HBM0 779 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 ENTPD7Q9NQZ7 604 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 A0A1B0GU03 582 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 A0A1B0GVM2 712 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 B4DLN1 442 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 AP3D1O14617 1153 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 GUCY1B2O75343 617 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 RRM1P23921 792 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 CCR9P51686 369 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 ERVK11-1P61568 191 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 DCAF7P61962 342 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 ST3GAL1Q11201 340 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 TSTQ16762 297 aaKnown RBP4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 CBWD5Q5RIA9 395 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 SLC9C2Q5TAH2 1124 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 GJB7Q6PEY0 223 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 R3HCC1LQ7Z5L2 792 aaKnown RBP4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 IL17RCQ8NAC3 791 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 ANKRD52Q8NB46 1076 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 ZNF485Q8NCK3 441 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 DNAAF1Q8NEP3 725 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 ZMIZ2Q8NF64 920 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 CD101Q93033 1021 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 MASTLQ96GX5 879 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 DUX3Q96PT4 197 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 HERC2P3Q9BVR0 1158 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 CTDSP1Q9GZU7 261 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 CXorf56Q9H5V9 222 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 TTC12Q9H892 705 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 UBTD1Q9HAC8 227 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 SCRT2Q9NQ03 307 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 EIF2B3Q9NR50 452 aaKnown RBP4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 ATP8A2Q9NTI2 1148 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 CNOT7Q9UIV1 285 aaKnown RBP4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 GPR34Q9UPC5 381 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 DNAJC16Q9Y2G8 782 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 CLDN16Q9Y5I7 305 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 NFS1Q9Y697 457 aa4.33□□□□□ -1.72
TRAPPC13-209ENST00000508304 PI4KAP2A4QPH2 592 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 F5H0A9 414 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 PEX12O00623 359 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 TMCC2O75069 709 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 SERPINC1P01008 464 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 CNPP09543 421 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 WEE2P0C1S8 567 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 MYF6P23409 242 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 PSMC2P35998 433 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 ARL3P36405 182 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 DRG2P55039 364 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 GALNT2Q10471 571 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 TROAPQ12815 778 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 C14orf177Q52M58 125 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 FAM133BQ5BKY9 247 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 RILPL1Q5EBL4 403 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 FAM69AQ5T7M9 428 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 NAA35Q5VZE5 725 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 RHBDF2Q6PJF5 856 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 KLHL24Q6TFL4 600 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 ATF7IPQ6VMQ6 1270 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 BBS12Q6ZW61 710 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 DGLUCYQ7Z3D6 616 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 RASSF8Q8NHQ8 419 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 NEK9Q8TD19 979 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 SECTM1Q8WVN6 248 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 HSPH1Q92598 858 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 RNF183Q96D59 192 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 SCMH1Q96GD3 660 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 APOPT1Q96IL0 206 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 TREX2Q9BQ50 279 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 MMTAG2Q9BU76 263 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 NPFFR1Q9GZQ6 430 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 WDR6Q9NNW5 1121 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 NLKQ9UBE8 527 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 CD207Q9UJ71 328 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 CAMK2AQ9UQM7 478 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 CYP46A1Q9Y6A2 500 aa4.32□□□□□ -1.72
TRAPPC13-209ENST00000508304 A0A0U1RQG5 324 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 VWA3AA6NCI4 1184 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 SLC25A17O43808 307 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 USO1O60763 962 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 ALOX12P18054 663 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 ABCD3P28288 659 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 HNF1BP35680 557 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 RPL3P39023 403 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 RAD52P43351 418 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 ATP12AP54707 1039 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 ME3Q16798 604 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 SETMARQ53H47 684 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 XKR9Q5GH70 373 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms