RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 INCA1Q0VD86 236 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 DNAJC3Q13217 504 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 NAPEPLDQ6IQ20 393 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 ZNF662Q6ZS27 426 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 STRA8Q7Z7C7 330 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 ACOT1Q86TX2 421 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 PRPF39Q86UA1 669 aaKnown RBP6.94□□□□□ -1.3
NR1I3-224ENST00000507215 GATAD2AQ86YP4 633 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 DENND1CQ8IV53 801 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 FMNL3Q8IVF7 1028 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 CCDC150Q8NCX0 1101 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 ADAMTS17Q8TE56 1095 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 CHTF18Q8WVB6 975 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 WBP2Q969T9 261 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 ERLEC1Q96DZ1 483 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 EPSTI1Q96J88 318 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 GBP4Q96PP9 640 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 OMDQ99983 421 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 DDX50Q9BQ39 737 aaKnown RBP6.94□□□□□ -1.3
NR1I3-224ENST00000507215 SMYD3Q9H7B4 428 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 MAGEF1Q9HAY2 307 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 PRSS16Q9NQE7 514 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 FBXL12Q9NXK8 326 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 RASAL2Q9UJF2 1139 aa6.94□□□□□ -1.3
NR1I3-224ENST00000507215 HBS1LQ9Y450 684 aaKnown RBP6.94□□□□□ -1.3
NR1I3-224ENST00000507215 A0A1W2PR77 199 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 NEMP2A6NFY4 417 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 C10orf142B7Z368 130 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 HHLA1C9JL84 531 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 K7ENP7 123 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 IKBKBO14920 756 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 KLK10O43240 276 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 LATO43561 262 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 EXOC3O60645 756 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 MOCS3O95396 460 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 SRPRAP08240 638 aaKnown RBP6.93□□□□□ -1.3
NR1I3-224ENST00000507215 CCDC130P13994 396 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 GOT1P17174 413 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 C5AR1P21730 350 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 HOXD9P28356 352 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-224ENST00000507215 RBMS1P29558 406 aaKnown RBP6.93□□□□□ -1.3
NR1I3-224ENST00000507215 HLA-FP30511 346 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 NDST1P52848 882 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 GALCP54803 685 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 IL9RQ01113 521 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 ENPEPQ07075 957 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 EFEMP1Q12805 493 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 RABEP1Q15276 862 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 CST6Q15828 149 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 HNRNPA1L2Q32P51 320 aaKnown RBP6.93□□□□□ -1.3
NR1I3-224ENST00000507215 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 KCNT1Q5JUK3 1230 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 FAM26FQ5R3K3 315 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 ARHGAP40Q5TG30 622 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 TMEM215Q68D42 235 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 INO80CQ6PI98 192 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-224ENST00000507215 NCEH1Q6PIU2 408 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 CHST9Q7L1S5 443 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 EPM2AIP1Q7L775 607 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-224ENST00000507215 DSG4Q86SJ6 1040 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 CACUL1Q86Y37 369 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 KIF18BQ86Y91 864 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 UNC45BQ8IWX7 931 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 PPM1KQ8N3J5 372 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 NUDT10Q8NFP7 164 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 WDR48Q8TAF3 677 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 TMA16Q96EY4 203 aaKnown RBP6.93□□□□□ -1.3
NR1I3-224ENST00000507215 CYFIP2Q96F07 1278 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 NUDT11Q96G61 164 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 SERAC1Q96JX3 654 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 DUSP16Q9BY84 665 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 ABCG4Q9H172 646 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 NMUR1Q9HB89 426 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 OSER1Q9NX31 292 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 IL17BQ9UHF5 180 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 GGA2Q9UJY4 613 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 PCDHGA8Q9Y5G5 932 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 SLCO1B1Q9Y6L6 691 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 LRRK2Q5S007 2527 aa6.93□□□□□ -1.3
NR1I3-224ENST00000507215 TLN1Q9Y490 2541 aaKnown RBP6.93□□□□□ -1.3
NR1I3-224ENST00000507215 EDDM13A0A1B0GTR0 161 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 FAM47DPA6NHR8 397 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 GOLGA6L22H0YM25 854 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 TGFB1I1O43294 461 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 RNASEH2AO75792 299 aaKnown RBP6.92□□□□□ -1.3
NR1I3-224ENST00000507215 BEST1O76090 585 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 KLHL18O94889 574 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 ASS1P00966 412 aaKnown RBP6.92□□□□□ -1.3
NR1I3-224ENST00000507215 CKMT1AP12532 417 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 GJB2P29033 226 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 NNMTP40261 264 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 SLC11A2P49281 568 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 CYP2J2P51589 502 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 SRSF1Q07955 248 aaKnown RBP eCLIP6.92□□□□□ -1.3
NR1I3-224ENST00000507215 ELAVL3Q14576 367 aaKnown RBP6.92□□□□□ -1.3
NR1I3-224ENST00000507215 STAT4Q14765 748 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 SHBQ15464 509 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 ZACNQ401N2 412 aa6.92□□□□□ -1.3
NR1I3-224ENST00000507215 SETMARQ53H47 684 aaPredicted RBP6.92□□□□□ -1.3
NR1I3-224ENST00000507215 NUGGCQ68CJ6 796 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms