RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 VIPR1P32241 457 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 MMP13P45452 471 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 TRIM14Q14142 442 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 ARHGEF7Q14155 803 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 ACOX1Q15067 660 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 PDK2Q15119 407 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 NFKBIBQ15653 356 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 SMTNL2Q2TAL5 461 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 CCDC122Q5T0U0 273 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 USP45Q70EL2 814 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 LUZP1Q86V48 1076 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 ARL14Q8N4G2 192 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 PCDH19Q8TAB3 1148 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 FAM71BQ8TC56 605 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 FATE1Q969F0 183 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 TSACCQ96A04 125 aaPredicted RBP14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 CCDC3Q9BQI4 270 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 STRADBQ9C0K7 418 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 PRORYQ9H606 182 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 PHPT1Q9NRX4 125 aaPredicted RBP14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 GPR34Q9UPC5 381 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 OR1A2Q9Y585 309 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 SPEGQ15772 3267 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 CCDC187A0A096LP49 1063 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 MPOP05164 745 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 KRT7P08729 469 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 H2AFZP0C0S5 128 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 MYCLP1P12525 358 aaPredicted RBP14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 MX2P20592 715 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 HNRNPH3P31942 346 aaKnown RBP14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 SLC25A11Q02978 314 aaKnown RBP14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 CLPPQ16740 277 aaPredicted RBP14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 SOWAHCQ53LP3 525 aaPredicted RBP14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 ARMC12Q5T9G4 340 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 PNCKQ6P2M8 343 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 ARHGAP36Q6ZRI8 547 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 H2AFVQ71UI9 128 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 GPR155Q7Z3F1 870 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 RD3Q7Z3Z2 195 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 KIAA1524Q8TCG1 905 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 CTNNBL1Q8WYA6 563 aaPredicted RBP14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 FUBP1Q96AE4 644 aaKnown RBP14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 TMEM159Q96B96 161 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 NUS1Q96E22 293 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 SCRN2Q96FV2 425 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 LIN37Q96GY3 246 aaPredicted RBP14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 HIC2Q96JB3 615 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 TMEM74Q96NL1 305 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 ZNF670Q9BS34 389 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 POLR1EQ9GZS1 481 aaKnown RBP14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 GULP1Q9UBP9 304 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 B4GALT6Q9UBX8 382 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 ENTPD2Q9Y5L3 495 aa14.46□□□□□ -0.09
HMGCS1-203ENST00000507004 ATRXP46100 2492 aa14.46□□□□□ -0.1
HMGCS1-203ENST00000507004 FREM2Q5SZK8 3169 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 ZZEF1O43149 2961 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 A0A087X0T9 212 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 CAPN8A6NHC0 703 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 NTN3O00634 580 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 CBFA2T2O43439 604 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 HEXIM1O94992 359 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 PEX11BO96011 259 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 TPM1P09493 284 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 FAM228BP0C875 321 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 MYF5P13349 255 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 GLB1P16278 677 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 ZNF30P17039 623 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 SSR1P43307 286 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 TLE3Q04726 772 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 SKOR2Q2VWA4 1001 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 PERM1Q5SV97 790 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 OGFOD3Q6PK18 319 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 TAF8Q7Z7C8 310 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 NLRP8Q86W28 1048 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 SPACA3Q8IXA5 215 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 TEX26Q8N6G2 289 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 GPR156Q8NFN8 814 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 ZNF564Q8TBZ8 553 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 PDCD6IPQ8WUM4 868 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 CPLX3Q8WVH0 158 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 KCNE4Q8WWG9 221 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 COQ10AQ96MF6 247 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 SLC46A1Q96NT5 459 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 GFM1Q96RP9 751 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 MCCC1Q96RQ3 725 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 GSDMCQ9BYG8 508 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 ZNHIT6Q9NWK9 470 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 TRNAU1APQ9NX07 287 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 APPL1Q9UKG1 709 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 PNMA8BQ9ULN7 279 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 PPIL1Q9Y3C6 166 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 ANKRD36A6QL64 1941 aa14.45□□□□□ -0.1
HMGCS1-203ENST00000507004 RP1P56715 2156 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 PGLSO95336 258 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 PRKCGP05129 697 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 ITPKBP27987 946 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 MAN1A1P33908 653 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 TMPRSS3P57727 454 aa14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 RPL26P61254 145 aaKnown RBP14.44□□□□□ -0.1
HMGCS1-203ENST00000507004 DPTQ07507 201 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms