RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 PDXPQ96GD0 296 aa16.33■□□□□ 0.2
SNX2-205ENST00000506874 LIN37Q96GY3 246 aaPredicted RBP16.33■□□□□ 0.2
SNX2-205ENST00000506874 ZNF641Q96N77 438 aaPredicted RBP16.33■□□□□ 0.2
SNX2-205ENST00000506874 SLC39A8Q9C0K1 460 aa16.33■□□□□ 0.2
SNX2-205ENST00000506874 DHX35Q9H5Z1 703 aaKnown RBP16.33■□□□□ 0.2
SNX2-205ENST00000506874 ABHD10Q9NUJ1 306 aa16.33■□□□□ 0.2
SNX2-205ENST00000506874 ZNHIT6Q9NWK9 470 aaKnown RBP16.33■□□□□ 0.2
SNX2-205ENST00000506874 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.2
SNX2-205ENST00000506874 A0A1W2PQM1 296 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 TMEM191CA6NGB0 347 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 CAPN8A6NHC0 703 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 ARHGAP42A6NI28 874 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 A8MX80 341 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 D6RAR5 112 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 K7ENP7 123 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 PLD2O14939 933 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 PALMO75781 387 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 ITGA2BP08514 1039 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 MYBL1P10243 752 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 KRT10P13645 584 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 HGFP14210 728 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 DESP17661 470 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 SLC5A2P31639 672 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 NDST2P52849 883 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 MTM1Q13496 603 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 CA9Q16790 459 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 TSR1Q2NL82 804 aaKnown RBP16.32■□□□□ 0.2
SNX2-205ENST00000506874 INO80CQ6PI98 192 aaPredicted RBP16.32■□□□□ 0.2
SNX2-205ENST00000506874 RAB11FIP2Q7L804 512 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 TAF8Q7Z7C8 310 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 TSEN2Q8NCE0 465 aaKnown RBP16.32■□□□□ 0.2
SNX2-205ENST00000506874 SNRNP27Q8WVK2 155 aaKnown RBP16.32■□□□□ 0.2
SNX2-205ENST00000506874 OR1E3Q8WZA6 343 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 STRADBQ9C0K7 418 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 LRRN3Q9H3W5 708 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 MRPL40Q9NQ50 206 aaKnown RBP16.32■□□□□ 0.2
SNX2-205ENST00000506874 PCSK1NQ9UHG2 260 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 ATXN7L1Q9ULK2 861 aaPredicted RBP16.32■□□□□ 0.2
SNX2-205ENST00000506874 NENFQ9UMX5 172 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 AP4E1Q9UPM8 1137 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
SNX2-205ENST00000506874 AKR1B15C9JRZ8 316 aaPredicted RBP16.31■□□□□ 0.2
SNX2-205ENST00000506874 J3QKU1 62 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 DFFAO00273 331 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 DAPK3O43293 454 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 RECQL5O94762 991 aaPredicted RBP16.31■□□□□ 0.2
SNX2-205ENST00000506874 PSMA2P25787 234 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 SERPINA4P29622 427 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 UGT1A5P35504 534 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 MLLT3P42568 568 aaPredicted RBP16.31■□□□□ 0.2
SNX2-205ENST00000506874 INHBCP55103 352 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 CCDC122Q5T0U0 273 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 ALKBH5Q6P6C2 394 aaKnown RBP16.31■□□□□ 0.2
SNX2-205ENST00000506874 ARHGAP36Q6ZRI8 547 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 SFTPA2Q8IWL1 248 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 FAM46DQ8NEK8 389 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 FUBP1Q96AE4 644 aaKnown RBP16.31■□□□□ 0.2
SNX2-205ENST00000506874 TUBGCP5Q96RT8 1024 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 CHP1Q99653 195 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 CINPQ9BW66 212 aaPredicted RBP16.31■□□□□ 0.2
SNX2-205ENST00000506874 TRIM7Q9C029 511 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 THAP2Q9H0W7 228 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 ATP13A3Q9H7F0 1226 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 SP110Q9HB58 689 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 FGF22Q9HCT0 170 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 DONSONQ9NYP3 566 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 PISDQ9UG56 409 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 MOSPD1Q9UJG1 213 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 SCINQ9Y6U3 715 aa16.31■□□□□ 0.2
SNX2-205ENST00000506874 SCN8AQ9UQD0 1980 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 TMEM202A6NGA9 273 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 TMX2-CTNND1H3BSU7 103 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 PYCARD-AS1I3L0S3 204 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 CACNB4O00305 520 aaPredicted RBP16.3■□□□□ 0.2
SNX2-205ENST00000506874 ELFN1P0C7U0 828 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 HTR7P34969 479 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 BCL2L1Q07817 233 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 RALGDSQ12967 914 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 AGERQ15109 404 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 ASTE1Q2TB18 679 aaPredicted RBP16.3■□□□□ 0.2
SNX2-205ENST00000506874 CCNJLQ8IV13 435 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 CNGA4Q8IV77 575 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 OR56A4Q8NGH8 313 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 MRFAP1L1Q96HT8 127 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 CCNL2Q96S94 520 aaPredicted RBP16.3■□□□□ 0.2
SNX2-205ENST00000506874 PEBP4Q96S96 227 aa16.3■□□□□ 0.2
SNX2-205ENST00000506874 KCTD15Q96SI1 283 aaPredicted RBP16.3■□□□□ 0.2
SNX2-205ENST00000506874 RBM15Q96T37 977 aaKnown RBP eCLIP16.3■□□□□ 0.23e-6■■□□□ 14.2
SNX2-205ENST00000506874 SUDS3Q9H7L9 328 aaPredicted RBP16.3■□□□□ 0.2
SNX2-205ENST00000506874 ASH1LQ9NR48 2969 aaKnown RBP16.29■□□□□ 0.2
SNX2-205ENST00000506874 TENM4Q6N022 2769 aa16.29■□□□□ 0.2
SNX2-205ENST00000506874 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
SNX2-205ENST00000506874 TTC24A2A3L6 582 aaPredicted RBP16.29■□□□□ 0.2
SNX2-205ENST00000506874 B4DGG1 531 aa16.29■□□□□ 0.2
SNX2-205ENST00000506874 JMJD7P0C870 316 aa16.29■□□□□ 0.2
SNX2-205ENST00000506874 ERCC2P18074 760 aa16.29■□□□□ 0.2
SNX2-205ENST00000506874 CSNK1DP48730 415 aa16.29■□□□□ 0.2
SNX2-205ENST00000506874 SCNN1BP51168 640 aa16.29■□□□□ 0.2
SNX2-205ENST00000506874 KIAA1024LP59773 190 aa16.29■□□□□ 0.2
SNX2-205ENST00000506874 EIF3IQ13347 325 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms