RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ZFR2Q9UPR6 939 aaKnown RBP7.31□□□□□ -1.24
GYPB-206ENST00000506516 ANKRD6Q9Y2G4 727 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 PPP2R2CQ9Y2T4 447 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 CAPN6Q9Y6Q1 641 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 EML5Q05BV3 1969 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 A0A1W2PR77 199 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 SLC30A4O14863 429 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 DDX3YO15523 660 aaKnown RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 GJB3O75712 270 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 PGLSO95336 258 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 HLA-DQB2P05538 268 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 PECAM1P16284 738 aaPredicted RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 PRLRP16471 622 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 MSNP26038 577 aaKnown RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 TNNT3P45378 269 aaPredicted RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 ARRB1P49407 418 aaPredicted RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 LIG3P49916 1009 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 EIF3EP60228 445 aaKnown RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 RPL26P61254 145 aaKnown RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 OTUD4Q01804 1114 aaKnown RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 DSC2Q02487 901 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 ADCY2Q08462 1091 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 SLC14A1Q13336 389 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 ZNF211Q13398 564 aaPredicted RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 ARHGEF7Q14155 803 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 PRKD1Q15139 912 aaPredicted RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 NOMO1Q15155 1222 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 KIF19Q2TAC6 998 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 LRRC73Q5JTD7 316 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 SEL1L2Q5TEA6 688 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 ALG1LQ6GMV1 187 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 CCDC70Q6NSX1 233 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 DARS2Q6PI48 645 aaKnown RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 USP45Q70EL2 814 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 B4GALNT4Q76KP1 1039 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 PID1Q7Z2X4 250 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 OXR1Q8N573 874 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 CNTD1Q8N815 330 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 DENND6BQ8NEG7 585 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 ARRDC2Q8TBH0 407 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 HTR3CQ8WXA8 447 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 ALG3Q92685 438 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 SCRN2Q96FV2 425 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 TEKT5Q96M29 485 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 WRAP53Q9BUR4 548 aaKnown RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 ADGRE3Q9BY15 652 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 SLC25A51Q9H1U9 297 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 ERVMER34-1Q9H9K5 563 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 GLOD4Q9HC38 313 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 KCTD5Q9NXV2 234 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 DLL3Q9NYJ7 618 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 KLHL8Q9P2G9 620 aaPredicted RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 TRHDEQ9UKU6 1024 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 RPL26L1Q9UNX3 145 aaKnown RBP7.3□□□□□ -1.24
GYPB-206ENST00000506516 CHKBQ9Y259 395 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 ITM2BQ9Y287 266 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 SNX11Q9Y5W9 270 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 WDR87Q6ZQQ6 2873 aa7.3□□□□□ -1.24
GYPB-206ENST00000506516 THADAQ6YHU6 1953 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 PLXND1Q9Y4D7 1925 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 A6NNZ2 444 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 A8MX80 341 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 ANKRD66B4E2M5 251 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 KCNK3O14649 394 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 TOR1BO14657 336 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 WNT9AO14904 365 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 FZD6O60353 706 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 STK10O94804 968 aaKnown RBP7.29□□□□□ -1.24
GYPB-206ENST00000506516 ELFN1P0C7U0 828 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 ZNF883P0CG24 379 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 THEGLP0DJG4 465 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 RBP3P10745 1247 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 C6P13671 934 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 PTPN3P26045 913 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 RBL1P28749 1068 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 VIPR1P32241 457 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 MMP12P39900 470 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 CD86P42081 329 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 PTGIRP43119 386 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 CTSKP43235 329 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 RABIFP47224 123 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 NXPH1P58417 271 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 YPEL5P62699 121 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 RELBQ01201 579 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 NIPAL4Q0D2K0 466 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 TRAF2Q12933 501 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 ZBTB17Q13105 803 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 PTK2BQ14289 1009 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 LRRC14Q15048 493 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 LIPIQ6XZB0 460 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 Q6ZSR6 202 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 DPPA4Q7L190 304 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 ABI3BPQ7Z7G0 1075 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 ZSWIM9Q86XI8 627 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 CDKL3Q8IVW4 592 aaPredicted RBP7.29□□□□□ -1.24
GYPB-206ENST00000506516 ABCA7Q8IZY2 2146 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 MEIOBQ8N635 442 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 KDF1Q8NAX2 398 aaPredicted RBP7.29□□□□□ -1.24
GYPB-206ENST00000506516 TMEM145Q8NBT3 493 aa7.29□□□□□ -1.24
GYPB-206ENST00000506516 ACTL9Q8TC94 416 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms