RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 RFLNAQ6ZTI6 216 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 BZW1Q7L1Q6 419 aaKnown RBP17.89■□□□□ 0.46
SMN1-204ENST00000506163 HSD11B1LQ7Z5J1 315 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 PLA2G15Q8NCC3 412 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 SPATA22Q8NHS9 363 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 TEKT5Q96M29 485 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 COQ10AQ96MF6 247 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 QKIQ96PU8 341 aaKnown RBP eCLIP17.89■□□□□ 0.46
SMN1-204ENST00000506163 RBM15Q96T37 977 aaKnown RBP eCLIP17.89■□□□□ 0.46
SMN1-204ENST00000506163 GLOD4Q9HC38 313 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 LZTFL1Q9NQ48 299 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 PCOLCE2Q9UKZ9 415 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 SPTY2D1-AS1A0A0U1RR47 76 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 MIF4GDA9UHW6 222 aaKnown RBP17.89■□□□□ 0.45
SMN1-204ENST00000506163 KRT86O43790 486 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 LZTS3O60299 673 aaPredicted RBP17.89■□□□□ 0.45
SMN1-204ENST00000506163 MAGEC1O60732 1142 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 NEBLO76041 1014 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 CCDC175P0C221 793 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 ELFN1P0C7U0 828 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 EPHA8P29322 1005 aaPredicted RBP17.89■□□□□ 0.45
SMN1-204ENST00000506163 VIPR1P32241 457 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 RABIFP47224 123 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 LRRC14Q15048 493 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 CRTC1Q6UUV9 634 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 ZNF567Q8N184 647 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 BAHD1Q8TBE0 780 aaPredicted RBP17.89■□□□□ 0.45
SMN1-204ENST00000506163 SETD7Q8WTS6 366 aaKnown RBP17.89■□□□□ 0.45
SMN1-204ENST00000506163 TRIB3Q96RU7 358 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 SLC25A51Q9H1U9 297 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 PCDH9Q9HC56 1237 aa17.89■□□□□ 0.45
SMN1-204ENST00000506163 A0A0J9YYE9 177 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 SDC3O75056 442 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 MT-CYBP00156 380 aaPredicted RBP17.88■□□□□ 0.45
SMN1-204ENST00000506163 TRBC1P01850 177 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 RBL1P28749 1068 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 EIF2B5Q13144 721 aaKnown RBP17.88■□□□□ 0.45
SMN1-204ENST00000506163 KLF1Q13351 362 aaPredicted RBP17.88■□□□□ 0.45
SMN1-204ENST00000506163 XRCC4Q13426 336 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 PDE1CQ14123 709 aaPredicted RBP17.88■□□□□ 0.45
SMN1-204ENST00000506163 INPP5AQ14642 412 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 CDKN3Q16667 212 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 KCTD16Q68DU8 428 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 SLC25A45Q8N413 288 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 UBL4BQ8N7F7 174 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 FAM174AQ8TBP5 190 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 HTR3CQ8WXA8 447 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 KCNF1Q9H3M0 494 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 UCKL1Q9NWZ5 548 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 R3HDM2Q9Y2K5 976 aaKnown RBP17.88■□□□□ 0.45
SMN1-204ENST00000506163 PPP2R2CQ9Y2T4 447 aa17.88■□□□□ 0.45
SMN1-204ENST00000506163 K7ESM1 405 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 ETV3P41162 512 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 ARRB1P49407 418 aaPredicted RBP17.87■□□□□ 0.45
SMN1-204ENST00000506163 PTSQ03393 145 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 QPCTQ16769 361 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 MEI1Q5TIA1 1274 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 DENND2CQ68D51 928 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 KDELC2Q7Z4H8 507 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 TECPR1Q7Z6L1 1165 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 LPCAT1Q8NF37 534 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 SLC32A1Q9H598 525 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 UBP1Q9NZI7 540 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 OR1A2Q9Y585 309 aa17.87■□□□□ 0.45
SMN1-204ENST00000506163 HACD1B0YJ81 288 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 F5H423 210 aaPredicted RBP17.86■□□□□ 0.45
SMN1-204ENST00000506163 H7C0C1 242 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 FLRT2O43155 660 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 PCCBP05166 539 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 ATP5OP48047 213 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 SUZ12Q15022 739 aaKnown RBP17.86■□□□□ 0.45
SMN1-204ENST00000506163 ACOX1Q15067 660 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 TRIP6Q15654 476 aaKnown RBP17.86■□□□□ 0.45
SMN1-204ENST00000506163 CCDC181Q5TID7 509 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 LRRC66Q68CR7 880 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 Q6ZVL8 140 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 DCP2Q8IU60 420 aaKnown RBP17.86■□□□□ 0.45
SMN1-204ENST00000506163 RHBDD1Q8TEB9 315 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 OXNAD1Q96HP4 312 aaPredicted RBP17.86■□□□□ 0.45
SMN1-204ENST00000506163 GORASP1Q9BQQ3 440 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 C1QTNF7Q9BXJ2 289 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 TCEAL2Q9H3H9 227 aaPredicted RBP17.86■□□□□ 0.45
SMN1-204ENST00000506163 USP29Q9HBJ7 922 aa17.86■□□□□ 0.45
SMN1-204ENST00000506163 ANKRD66B4E2M5 251 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 TJP3O95049 919 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 CLDN7O95471 211 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 CSF2P04141 144 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 ITGAVP06756 1048 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 C1SP09871 688 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 GIMD1P0DJR0 217 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 RBP3P10745 1247 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 CYP2A6P11509 494 aaPredicted RBP17.85■□□□□ 0.45
SMN1-204ENST00000506163 NFKB1P19838 968 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 DGKAP23743 735 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 EIF3EP60228 445 aaKnown RBP17.85■□□□□ 0.45
SMN1-204ENST00000506163 SIM1P81133 766 aaPredicted RBP17.85■□□□□ 0.45
SMN1-204ENST00000506163 GALNT3Q14435 633 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 KDELC1Q6UW63 502 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 USP45Q70EL2 814 aa17.85■□□□□ 0.45
SMN1-204ENST00000506163 PID1Q7Z2X4 250 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms