RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 SLC25A13Q9UJS0 675 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 FBXO10Q9UK96 956 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 INTS6Q9UL03 887 aaKnown RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 SLC39A10Q9ULF5 831 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CORO1CQ9ULV4 474 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CLEC4EQ9ULY5 219 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CCL26Q9Y258 94 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 ACOT9Q9Y305 439 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 KCTD3Q9Y597 815 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 PCDHGC4Q9Y5F7 938 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 A0A1W2PQ67 120 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 CCDC162PA2VCL2 907 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 PFDN6O15212 129 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 CD3EAPO15446 510 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 HTRA2O43464 458 aaPredicted RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 GPR37L1O60883 481 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 SOCS5O75159 536 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 HAUS5O94927 633 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 PGLSO95336 258 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 PRAMEF12O95522 483 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 S1PR4O95977 384 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 MT-CO1P00395 513 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 GOT2P00505 430 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 PDHA1P08559 390 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 PABPC1P11940 636 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 CPA3P15088 417 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 STMN1P16949 149 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 CEBPBP17676 345 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 BGNP21810 368 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 ALDH3A1P30838 453 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 SLC26A3P40879 764 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 GRIA4P48058 902 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 NUMBP49757 651 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 VASPP50552 380 aaPredicted RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 ARSDP51689 593 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 KPNA2P52292 529 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 EPHB1P54762 984 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 SLC12A2P55011 1212 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 RAB10P61026 200 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 TMPRSS15P98073 1019 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 RAD51Q06609 339 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 BCL2L1Q07817 233 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 STX3Q13277 289 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 SMAD1Q15797 465 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 TSNAXIP1Q2TAA8 658 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 FASTKD1Q53R41 847 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 PPM1JQ5JR12 505 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 TMEM31Q5JXX7 168 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 LY6G5CQ5SRR4 150 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 FAM45BPQ6NSW5 357 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 CGB2Q6NT52 195 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 C16orf46Q6P387 395 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 AFTPHQ6ULP2 937 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 RAPH1Q70E73 1250 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 GLT6D1Q7Z4J2 308 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 CMC1Q7Z7K0 106 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 ADGRD2Q7Z7M1 963 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 RBM23Q86U06 439 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 SLC41A1Q8IVJ1 513 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 OTUD6BQ8N6M0 293 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 PCDH20Q8N6Y1 951 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 CCDC63Q8NA47 563 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 MDGA1Q8NFP4 955 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 OR2AP1Q8NGE2 309 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 OR4L1Q8NH43 312 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 RDH11Q8TC12 318 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 FAM45AQ8TCE6 357 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 PIH1D2Q8WWB5 315 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 SREK1Q8WXA9 508 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 BHMTQ93088 406 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 PPP2R3CQ969Q6 453 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 MRPL38Q96DV4 380 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 ELMO2Q96JJ3 720 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 DNAJC1Q96KC8 554 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 EXOC2Q96KP1 924 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 C7orf26Q96N11 449 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 TUBGCP5Q96RT8 1024 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 BBS2Q9BXC9 721 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 TRIM55Q9BYV6 548 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 CPEB1Q9BZB8 566 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 LINC00597Q9H2U6 94 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 SFXN1Q9H9B4 322 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 MAGEE1Q9HCI5 957 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 SLCO1B3Q9NPD5 702 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 FBXO6Q9NRD1 293 aaPredicted RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 OBP2AQ9NY56 170 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 EMCNQ9ULC0 261 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 RUVBL2Q9Y230 463 aaKnown RBP8.07□□□□□ -1.12
COL4A5-208ENST00000505728 HS3ST2Q9Y278 367 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 VWA7Q9Y334 891 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 SPO11Q9Y5K1 396 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 ARL5AQ9Y689 179 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 USH1CQ9Y6N9 552 aa8.07□□□□□ -1.12
COL4A5-208ENST00000505728 NUP210Q8TEM1 1887 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 GRXCR2A6NFK2 248 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 NEDD8-MDP1E9PL57 170 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 H3BQ06 376 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 H7C0S8 307 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms