RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 RHBDF2Q6PJF5 856 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 KLHL24Q6TFL4 600 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 CRELD2Q6UXH1 353 aaPredicted RBP3.94□□□□□ -1.78
CHD1-203ENST00000505657 DLK2Q6UY11 383 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 LINGO2Q7L985 606 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 C16orf82Q7Z2V1 217 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 SCCPDHQ8NBX0 429 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 SMRP1Q8NCR6 262 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 AGBL3Q8NEM8 1001 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 BEST2Q8NFU1 509 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 OTULINQ96BN8 352 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 SAAL1Q96ER3 474 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 SCMH1Q96GD3 660 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 TM6SF1Q9BZW5 370 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 GAREM1Q9H706 876 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 SELENONQ9NZV5 590 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 PAM16Q9Y3D7 125 aa3.94□□□□□ -1.78
CHD1-203ENST00000505657 USP17L23D6RBM5 183 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 SOCS6O14544 535 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 MTA2O94776 668 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 RTN3O95197 1032 aaPredicted RBP3.93□□□□□ -1.78
CHD1-203ENST00000505657 FTCDO95954 541 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 CDAP32320 146 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 GABRB2P47870 512 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 EIF3BP55884 814 aaKnown RBP3.93□□□□□ -1.78
CHD1-203ENST00000505657 TUBA1BP68363 451 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 CEBPZQ03701 1054 aaKnown RBP3.93□□□□□ -1.78
CHD1-203ENST00000505657 TMEM115Q12893 351 aaPredicted RBP3.93□□□□□ -1.78
CHD1-203ENST00000505657 DCTN2Q13561 401 aaKnown RBP3.93□□□□□ -1.78
CHD1-203ENST00000505657 ASIC2Q16515 512 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 CDC73Q6P1J9 531 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 ATF7IPQ6VMQ6 1270 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 LILRB1Q8NHL6 650 aaPredicted RBP3.93□□□□□ -1.78
CHD1-203ENST00000505657 CREB3L4Q8TEY5 395 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 PSPC1Q8WXF1 523 aaKnown RBP3.93□□□□□ -1.78
CHD1-203ENST00000505657 RFFLQ8WZ73 363 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 GTF3C6Q969F1 213 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 PPP1R13BQ96KQ4 1090 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 CTAGE1Q96RT6 745 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 MEIS3Q99687 375 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 C1QTNF5Q9BXJ0 243 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 SLCO5A1Q9H2Y9 848 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 KIF9Q9HAQ2 790 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 ABI3Q9P2A4 366 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 SLCO3A1Q9UIG8 710 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 FBXO9Q9UK97 447 aaPredicted RBP3.93□□□□□ -1.78
CHD1-203ENST00000505657 RCOR1Q9UKL0 485 aa3.93□□□□□ -1.78
CHD1-203ENST00000505657 A0A1W2PQF6 199 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 LRRC53A6NM62 1247 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 B4E171 279 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 PLRG1O43660 514 aaKnown RBP3.92□□□□□ -1.78
CHD1-203ENST00000505657 KDM4BO94953 1096 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 FGF3P11487 239 aaPredicted RBP3.92□□□□□ -1.78
CHD1-203ENST00000505657 IL7RP16871 459 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 MAOAP21397 527 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 GPTP24298 496 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 KRT9P35527 623 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 PBX3P40426 434 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 ARL1P40616 181 aaPredicted RBP3.92□□□□□ -1.78
CHD1-203ENST00000505657 TSPAN7P41732 249 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 PIP4K2AP48426 406 aaPredicted RBP3.92□□□□□ -1.78
CHD1-203ENST00000505657 ART1P52961 327 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 POU5F1BQ06416 359 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 TRAF2Q12933 501 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 NAE1Q13564 534 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 NEDD9Q14511 834 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 GSTA3Q16772 222 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 IZUMO4Q1ZYL8 232 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 AMZ1Q400G9 498 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 SLC45A4Q5BKX6 768 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 CXorf66Q5JRM2 361 aaPredicted RBP3.92□□□□□ -1.78
CHD1-203ENST00000505657 WDR73Q6P4I2 378 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 ADHFE1Q8IWW8 467 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 CCDC13Q8IYE1 715 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 RBMXL3Q8N7X1 1067 aaKnown RBP3.92□□□□□ -1.78
CHD1-203ENST00000505657 OR2AK2Q8NG84 335 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 SPATA22Q8NHS9 363 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 SLC41A2Q96JW4 573 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 SLITRK1Q96PX8 696 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 FAM110AQ9BQ89 295 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 C6orf106Q9H6K1 298 aaPredicted RBP3.92□□□□□ -1.78
CHD1-203ENST00000505657 MMP25Q9NPA2 562 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 GPR108Q9NPR9 543 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 CNGB3Q9NQW8 809 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 PROCRQ9UNN8 238 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 PCDHGB1Q9Y5G3 927 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 SNX9Q9Y5X1 595 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 CEPT1Q9Y6K0 416 aa3.92□□□□□ -1.78
CHD1-203ENST00000505657 DOCK7Q96N67 2140 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 IGLV5-37A0A075B6J1 123 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 CLDN14O95500 239 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 HOXB5P09067 269 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 TNFAIP3P21580 790 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 STX2P32856 288 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 DDIT3P35638 169 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 OLR1P78380 273 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 DLG1Q12959 904 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 SF3B4Q15427 424 aaKnown RBP eCLIP3.91□□□□□ -1.783e-10■■■■□ 19.3
CHD1-203ENST00000505657 PPP6R3Q5H9R7 873 aaPredicted RBP3.91□□□□□ -1.78
CHD1-203ENST00000505657 DIS3L2Q8IYB7 885 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms