RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 TRMT10BQ6PF06 316 aaKnown RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 ZNF852Q6ZMS4 543 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 DPY19L3Q6ZPD9 716 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 PRR23CQ6ZRP0 262 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 PRR23BQ6ZRT6 265 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 TPRG1Q6ZUI0 275 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 CROCCP2Q86T23 111 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 CAMK1DQ8IU85 385 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 SFTPA1Q8IWL2 248 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 CTAGE3PQ8IX95 158 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 ZNF366Q8N895 744 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.4□□□□□ -0.9
TPM3-218ENST00000505010 CHST14Q8NCH0 376 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 GRIN3AQ8TCU5 1115 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 UCMAQ8WVF2 138 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 CHFRQ96EP1 664 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 RANBP9Q96S59 729 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 CYTH2Q99418 400 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 SH3GL2Q99962 352 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 TMEM109Q9BVC6 243 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 KIFC1Q9BW19 673 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 ADGRE3Q9BY15 652 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 ROPN1BQ9BZX4 212 aaPredicted RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 ROPN1Q9HAT0 212 aaPredicted RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 PLAC1Q9HBJ0 212 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 ARNT2Q9HBZ2 717 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 TMBIM4Q9HC24 238 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 MRM3Q9HC36 420 aaKnown RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 PPANQ9NQ55 473 aaKnown RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 PRMT8Q9NR22 394 aaPredicted RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 CHRAC1Q9NRG0 131 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 BCCIPQ9P287 314 aaKnown RBP eCLIP9.4□□□□□ -0.9
TPM3-218ENST00000505010 PLA2G4CQ9UP65 541 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 SPEGQ15772 3267 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 GOLGA8KD6RF30 607 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 RGS16O15492 202 aaPredicted RBP9.39□□□□□ -0.91
TPM3-218ENST00000505010 TIMM44O43615 452 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 GDF9O60383 454 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 PIAS1O75925 651 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 POP4O95707 220 aaKnown RBP9.39□□□□□ -0.91
TPM3-218ENST00000505010 SYF2O95926 243 aaKnown RBP9.39□□□□□ -0.91
TPM3-218ENST00000505010 UGT2B4P06133 528 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 PROS1P07225 676 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 PDHA1P08559 390 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 CTPS1P17812 591 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 TARSP26639 723 aaKnown RBP9.39□□□□□ -0.91
TPM3-218ENST00000505010 GRIA2P42262 883 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 MSH2P43246 934 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 GRIA4P48058 902 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 TMED2Q15363 201 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 QPCTQ16769 361 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 KBTBD12Q3ZCT8 623 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 ANKRD20A4Q4UJ75 823 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 TTMPQ5BVD1 217 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 SERPINA13PQ6UXR4 307 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 NUDT18Q6ZVK8 323 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 UNC5BQ8IZJ1 945 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 PPM1NQ8N819 430 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 OR2A12Q8NGT7 310 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 ARL8AQ96BM9 186 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 MFSD3Q96ES6 412 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 CERS2Q96G23 380 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 FCRL3Q96P31 734 aaPredicted RBP9.39□□□□□ -0.91
TPM3-218ENST00000505010 SMIM14Q96QK8 99 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 TUBGCP5Q96RT8 1024 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 PAFAH2Q99487 392 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 P2RY13Q9BPV8 354 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 MTG2Q9H4K7 406 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 PPCSQ9HAB8 311 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 C20orf96Q9NUD7 363 aaPredicted RBP9.39□□□□□ -0.91
TPM3-218ENST00000505010 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.39□□□□□ -0.91
TPM3-218ENST00000505010 IL1RAPL1Q9NZN1 696 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 PSMC3IPQ9P2W1 217 aaPredicted RBP9.39□□□□□ -0.91
TPM3-218ENST00000505010 CTNNAL1Q9UBT7 734 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 SLC24A2Q9UI40 661 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 SPO11Q9Y5K1 396 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 IKBKGQ9Y6K9 419 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 CKAP5Q14008 2032 aa9.39□□□□□ -0.91
TPM3-218ENST00000505010 ZZEF1O43149 2961 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 EDDM13A0A1B0GTR0 161 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 ZCWPW2A0A1B0GU75 182 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 FAM159BA6NKW6 160 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 SPECC1L-ADORA2AF8WAN1 911 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 FZD6O60353 706 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 RNF40O75150 1001 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 CDH16O75309 829 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 TCEA3O75764 348 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 ALDH1A2O94788 518 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 CRTAMO95727 393 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 PRLP01236 227 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 INHBAP08476 426 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 ERVK-10P10266 1014 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 HLA-EP13747 358 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 PAMP19021 973 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 PRKCHP24723 683 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 GCAP28676 217 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 CTHP32929 405 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 ABL2P42684 1182 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms