RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CPED1A4D0V7 1026 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 TMEM202A6NGA9 273 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 DAPK3O43293 454 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 DXOO77932 396 aaKnown RBP13.2□□□□□ -0.3
DDX41-204ENST00000504807 MAP3K6O95382 1288 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 CYP1A2P05177 515 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 LSSP48449 732 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 SCNN1BP51168 640 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 TAS2R40P59535 323 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 RAD51Q06609 339 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 TRAF2Q12933 501 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 LBRQ14739 615 aaKnown RBP13.2□□□□□ -0.3
DDX41-204ENST00000504807 LRRC14Q15048 493 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 AGERQ15109 404 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 ZCCHC8Q6NZY4 707 aaKnown RBP13.2□□□□□ -0.3
DDX41-204ENST00000504807 LIPIQ6XZB0 460 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 RFLNAQ6ZTI6 216 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 EFL1Q7Z2Z2 1120 aaKnown RBP13.2□□□□□ -0.3
DDX41-204ENST00000504807 ZSCAN30Q86W11 494 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 PSTKQ8IV42 348 aaKnown RBP13.2□□□□□ -0.3
DDX41-204ENST00000504807 HCAR2Q8TDS4 363 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 OR1E3Q8WZA6 343 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 PSKH2Q96QS6 385 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 TUBGCP5Q96RT8 1024 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 ARHGAP9Q9BRR9 750 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 APOOQ9BUR5 198 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 NUP85Q9BW27 656 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 CINPQ9BW66 212 aaPredicted RBP13.2□□□□□ -0.3
DDX41-204ENST00000504807 POLR1BQ9H9Y6 1135 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 SP110Q9HB58 689 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 FGF22Q9HCT0 170 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 ASCL3Q9NQ33 180 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 MRPL40Q9NQ50 206 aaKnown RBP13.2□□□□□ -0.3
DDX41-204ENST00000504807 IFNKQ9P0W0 207 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 SSUH2Q9Y2M2 353 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 PCDHGC4Q9Y5F7 938 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 SCINQ9Y6U3 715 aa13.2□□□□□ -0.3
DDX41-204ENST00000504807 EME2A4GXA9 379 aaPredicted RBP13.19□□□□□ -0.3
DDX41-204ENST00000504807 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
DDX41-204ENST00000504807 MFSD11O43934 449 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 CSO75390 466 aaKnown RBP13.19□□□□□ -0.3
DDX41-204ENST00000504807 RECQL5O94762 991 aaPredicted RBP13.19□□□□□ -0.3
DDX41-204ENST00000504807 FUCA1P04066 466 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 GP1BAP07359 652 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 MYBL1P10243 752 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 ALPPL2P10696 532 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 ITGB6P18564 788 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 LHCGRP22888 699 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 CASP14P31944 242 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 THOP1P52888 689 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 UBASH3AP57075 661 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 YPEL5P62699 121 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 ZBED6P86452 979 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 NFATC4Q14934 902 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 ZSCAN23Q3MJ62 389 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 PPP1R2P3Q6NXS1 205 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 BRAT1Q6PJG6 821 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 ENPP7Q6UWV6 458 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 DPPA4Q7L190 304 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 NIPA2Q8N8Q9 360 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 KYQ8NBH2 561 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 CCL4L1Q8NHW4 92 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 PCDH19Q8TAB3 1148 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 FAM71BQ8TC56 605 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 SYN2Q92777 582 aaPredicted RBP13.19□□□□□ -0.3
DDX41-204ENST00000504807 EXTL1Q92935 676 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 PRR11Q96HE9 360 aaPredicted RBP13.19□□□□□ -0.3
DDX41-204ENST00000504807 PSMG3-AS1Q96PY0 264 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
DDX41-204ENST00000504807 XPO4Q9C0E2 1151 aaKnown RBP13.19□□□□□ -0.3
DDX41-204ENST00000504807 NOD2Q9HC29 1040 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 B4GALT6Q9UBX8 382 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 SALL4Q9UJQ4 1053 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 ANAPC7Q9UJX3 599 aa13.19□□□□□ -0.3
DDX41-204ENST00000504807 BLACEA4D250 179 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 NEMP2A6NFY4 417 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 LMO7DNF2Z398 122 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 H3BM21 787 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 H3BRJ5 948 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 TPP1O14773 563 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 HTRA2O43464 458 aaPredicted RBP13.18□□□□□ -0.3
DDX41-204ENST00000504807 LZTS3O60299 673 aaPredicted RBP13.18□□□□□ -0.3
DDX41-204ENST00000504807 SERPING1P05155 500 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 FAM87AP0C7U9 286 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 XPAP23025 273 aaPredicted RBP13.18□□□□□ -0.3
DDX41-204ENST00000504807 SERPINA4P29622 427 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 HK3P52790 923 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 E2F1Q01094 437 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 PPARDQ03181 441 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 BCL2L1Q07817 233 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
DDX41-204ENST00000504807 ELP6Q0PNE2 266 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 CNGA3Q16281 694 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 FAXCQ5TGI0 409 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 TMCO4Q5TGY1 634 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 NCBP2-AS2Q69YL0 99 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 RD3Q7Z3Z2 195 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 TSPAN33Q86UF1 283 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 HID1Q8IV36 788 aa13.18□□□□□ -0.3
DDX41-204ENST00000504807 CBARPQ8N350 705 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms