RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 LGALS13Q9UHV8 139 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 DYRK1BQ9Y463 629 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 PRMT5O14744 637 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-207ENST00000504761 GRM6O15303 877 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 HDAC3O15379 428 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 GOT2P00505 430 aaKnown RBP14.13□□□□□ -0.15
TCOF1-207ENST00000504761 LBX1P52954 281 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 PHEXP78562 749 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 PLCL1Q15111 1095 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 ARCQ7LC44 396 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 FAM124AQ86V42 546 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 TBC1D19Q8N5T2 526 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 MIPOL1Q8TD10 442 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 DNAJC9Q8WXX5 260 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 PLD4Q96BZ4 506 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 FCRL5Q96RD9 977 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 TMEM175Q9BSA9 504 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 ZCCHC2Q9C0B9 1178 aaKnown RBP14.13□□□□□ -0.15
TCOF1-207ENST00000504761 A0A0D9SEW6 157 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 ELFN1P0C7U0 828 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 CACNA2D1P54289 1103 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 ST13P4Q8IZP2 240 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-207ENST00000504761 CLEC4FQ8N1N0 589 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 PRPF18Q99633 342 aaKnown RBP14.13□□□□□ -0.15
TCOF1-207ENST00000504761 CAPN10Q9HC96 672 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.13□□□□□ -0.159e-6■■□□□ 12.8
TCOF1-207ENST00000504761 SLC2A6Q9UGQ3 507 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 MGAT4DA6NG13 374 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 INPPL1O15357 1258 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 INSCQ1MX18 579 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 KIAA1324Q6UXG2 1013 aaKnown RBP14.12□□□□□ -0.15
TCOF1-207ENST00000504761 CYP2R1Q6VVX0 501 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 SLC22A17Q8WUG5 538 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 SH3BP4Q9P0V3 963 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 TBC1D14Q9P2M4 693 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 GNPTGQ9UJJ9 305 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 ZNF510Q9Y2H8 683 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 ARAP2Q8WZ64 1704 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 ABLIM1O14639 778 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 ADAMTS4O75173 837 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 CAPN15O75808 1086 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 ADH1CP00326 375 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 PKMP14618 531 aaKnown RBP14.12□□□□□ -0.15
TCOF1-207ENST00000504761 FOXN2P32314 431 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 PRKAA2P54646 552 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 USP46P62068 366 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 MOGSQ13724 837 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 SIX1Q15475 284 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-207ENST00000504761 CPSF6Q16630 551 aaKnown RBP eCLIP14.12□□□□□ -0.153e-9■□□□□ 9
TCOF1-207ENST00000504761 BRD9Q9H8M2 597 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 USP29Q9HBJ7 922 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 KIF17Q9P2E2 1029 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 SNX13Q9Y5W8 968 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 MRASO14807 208 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 PRAMEF1O95521 474 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 TOP3BO95985 862 aaKnown RBP14.12□□□□□ -0.15
TCOF1-207ENST00000504761 SOD2P04179 222 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 PIK3CGP48736 1102 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 IRF5Q13568 498 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 PAFAH1B3Q15102 231 aaKnown RBP14.12□□□□□ -0.15
TCOF1-207ENST00000504761 CXorf40AQ8TE69 158 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 DPY30Q9C005 99 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 ZFP14Q9HCL3 533 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 INSL5Q9Y5Q6 135 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 CDK5RAP2Q96SN8 1893 aa14.12□□□□□ -0.15
TCOF1-207ENST00000504761 C5orf58C9J3I9 102 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 PLIN3O60664 434 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 PFKMP08237 780 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ANXA5P08758 320 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 EEF1DP29692 281 aaKnown RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 IRF8Q02556 426 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 PTPRCAPQ14761 206 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 SLC39A5Q6ZMH5 540 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ARFGAP1Q8N6T3 406 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 JADE3Q92613 823 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 WRAP53Q9BUR4 548 aaKnown RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 NMUR2Q9GZQ4 415 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 HPS4Q9NQG7 708 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 DUS2Q9NX74 493 aaKnown RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 KCTD3Q9Y597 815 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 TEX264Q9Y6I9 313 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 KIAA1551Q9HCM1 1747 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 UNC5CO95185 931 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 CATP04040 527 aaKnown RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 EPHX1P07099 455 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 CES1P23141 567 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 SLC1A2P43004 574 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 HCAR3P49019 387 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 MSLNQ13421 630 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 CRTC3Q6UUV7 619 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 NAPRTQ6XQN6 538 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 FAM126BQ8IXS8 530 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 STYXQ8WUJ0 223 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 HBEGFQ99075 208 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 C11orf84Q9BUA3 381 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 TBC1D10AQ9BXI6 508 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 SLC7A5P2Q9GIP4 190 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 SQORQ9Y6N5 450 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ECM29Q5VYK3 1845 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 EVPLQ92817 2033 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms