RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 RBBP6Q7Z6E9 1792 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MN1Q10571 1320 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 A8MUA0 341 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CAPN5O15484 640 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 EIF1BO60739 113 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 NIPSNAP2O75323 286 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PAGE1O75459 146 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TRIM16O95361 564 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 EYA4O95677 639 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 NDUFB10O96000 172 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 APOA1P02647 267 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 HMGN1P05114 100 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SERPIND1P05546 499 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 KRT8P05787 483 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PGK2P07205 417 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ASNSP08243 561 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PAX1P15863 534 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF12P17014 697 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CDH3P22223 829 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 YWHABP31946 246 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TRIM23P36406 574 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 EIF1P41567 113 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 RAP1GDS1P52306 607 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PRKCQQ04759 706 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TNK2Q07912 1038 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TROAPQ12815 778 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 DDX39BQ13838 428 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 FRG1Q14331 258 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TAF5Q15542 800 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TCTE1Q5JU00 501 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM182AQ5T1J6 154 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 OTUD3Q5T2D3 398 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MEI1Q5TIA1 1274 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TTC33Q6PID6 262 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 NPSR1Q6W5P4 371 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 GPR141Q7Z602 305 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CDH24Q86UP0 819 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 METTL23Q86XA0 190 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 LIX1Q8N485 282 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PPHLN1Q8NEY8 458 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 OR2T34Q8NGX1 318 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ZSCAN18Q8TBC5 510 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 UTP15Q8TED0 518 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 BTN2A2Q8WVV5 523 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 DDX1Q92499 740 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 MENTQ9BUN1 341 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 RUSC1Q9BVN2 902 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TTYH3Q9C0H2 523 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TWSG1Q9GZX9 223 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SEMA6BQ9H3T3 888 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 NMUR1Q9HB89 426 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 LATS2Q9NRM7 1088 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 EBF1Q9UH73 591 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 DTNAQ9Y4J8 743 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 A0A087X0B3 334 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM150BA6NC51 233 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 NCF1BA6NI72 391 aaPredicted RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 NCF1CA8MVU1 366 aaPredicted RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ADCY6O43306 1168 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 MTSS1O43312 755 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 BRINP1O60477 761 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 TSC22D2O75157 780 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ZMPSTE24O75844 475 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 AKAP3O75969 853 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 SUPT7LO94864 414 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 WDR47O94967 919 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 RASGRP1O95267 797 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 BMP10O95393 424 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ITGB1P05556 798 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 CTSHP09668 335 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ZSCAN5DPP0CG00 497 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 DBTP11182 482 aaKnown RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 MYL4P12829 197 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 EDN3P14138 238 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 NCF1P14598 390 aaPredicted RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 NELFEP18615 380 aaKnown RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 MSX2P35548 267 aaPredicted RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 PCP4P48539 62 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ATN1P54259 1190 aaPredicted RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 PSMC6P62333 389 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 DGKZQ13574 1117 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ACVR2BQ13705 512 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 IRF3Q14653 427 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 C16orf72Q14CZ0 275 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 OASLQ15646 514 aaKnown RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF829Q3KNS6 432 aaPredicted RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 TOR2AQ5JU69 321 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 WASHC2DQ5SRD0 308 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 AGBL2Q5U5Z8 902 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 AAGABQ6PD74 315 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 CYP2R1Q6VVX0 501 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 BEND4Q6ZU67 534 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 C12orf40Q86WS4 652 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 LRRC6Q86X45 466 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 PLD3Q8IV08 490 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 GPD1LQ8N335 351 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 PARP8Q8N3A8 854 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 DNAJC5GQ8N7S2 189 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 FBXO36Q8NEA4 188 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms