RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CACNB4O00305 520 aaPredicted RBP12□□□□□ -0.49
MED28-203ENST00000503945 CBFA2T2O43439 604 aa12□□□□□ -0.49
MED28-203ENST00000503945 GYPCP04921 128 aa12□□□□□ -0.49
MED28-203ENST00000503945 PCCBP05166 539 aa12□□□□□ -0.49
MED28-203ENST00000503945 HOXC4P09017 264 aaPredicted RBP12□□□□□ -0.49
MED28-203ENST00000503945 TPM1P09493 284 aa12□□□□□ -0.49
MED28-203ENST00000503945 CES1P23141 567 aa12□□□□□ -0.49
MED28-203ENST00000503945 KELP23276 732 aa12□□□□□ -0.49
MED28-203ENST00000503945 IL4RP24394 825 aa12□□□□□ -0.49
MED28-203ENST00000503945 MMP13P45452 471 aa12□□□□□ -0.49
MED28-203ENST00000503945 TLE3Q04726 772 aa12□□□□□ -0.49
MED28-203ENST00000503945 C6orf132Q5T0Z8 1188 aa12□□□□□ -0.49
MED28-203ENST00000503945 ZFYVE27Q5T4F4 411 aa12□□□□□ -0.49
MED28-203ENST00000503945 TXNRD3NBQ6F5E7 133 aa12□□□□□ -0.49
MED28-203ENST00000503945 PNCKQ6P2M8 343 aa12□□□□□ -0.49
MED28-203ENST00000503945 DPPA4Q7L190 304 aa12□□□□□ -0.49
MED28-203ENST00000503945 SPACA3Q8IXA5 215 aa12□□□□□ -0.49
MED28-203ENST00000503945 ZNF843Q8N446 348 aa12□□□□□ -0.49
MED28-203ENST00000503945 WDR48Q8TAF3 677 aa12□□□□□ -0.49
MED28-203ENST00000503945 CTNNBL1Q8WYA6 563 aaPredicted RBP12□□□□□ -0.49
MED28-203ENST00000503945 NAT6Q93015 286 aa12□□□□□ -0.49
MED28-203ENST00000503945 NAF1Q96HR8 494 aaKnown RBP12□□□□□ -0.49
MED28-203ENST00000503945 WDR92Q96MX6 357 aa12□□□□□ -0.49
MED28-203ENST00000503945 LRRC61Q9BV99 259 aa12□□□□□ -0.49
MED28-203ENST00000503945 XPO4Q9C0E2 1151 aaKnown RBP12□□□□□ -0.49
MED28-203ENST00000503945 CLPBQ9H078 707 aa12□□□□□ -0.49
MED28-203ENST00000503945 DEF6Q9H4E7 631 aa12□□□□□ -0.49
MED28-203ENST00000503945 HAUS2Q9NVX0 235 aa12□□□□□ -0.49
MED28-203ENST00000503945 UVRAGQ9P2Y5 699 aa12□□□□□ -0.49
MED28-203ENST00000503945 KLQ9UEF7 1012 aa12□□□□□ -0.49
MED28-203ENST00000503945 PNMA8BQ9ULN7 279 aaPredicted RBP12□□□□□ -0.49
MED28-203ENST00000503945 PCDHB1Q9Y5F3 818 aa12□□□□□ -0.49
MED28-203ENST00000503945 U3KQA8 63 aa12□□□□□ -0.49
MED28-203ENST00000503945 KALRNO60229 2985 aa12□□□□□ -0.49
MED28-203ENST00000503945 MGAQ8IWI9 3026 aa12□□□□□ -0.49
MED28-203ENST00000503945 TEX51A0A1B0GUA7 166 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 TNFRSF10CO14798 259 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 HTRA2O43464 458 aaPredicted RBP11.99□□□□□ -0.49
MED28-203ENST00000503945 AKR1B10O60218 316 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 SOCS5O75159 536 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 CSO75390 466 aaKnown RBP11.99□□□□□ -0.49
MED28-203ENST00000503945 PEX11BO96011 259 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 KRT7P08729 469 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 CYP2A6P11509 494 aaPredicted RBP11.99□□□□□ -0.49
MED28-203ENST00000503945 PLA2G2AP14555 144 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 TGM2P21980 687 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 HNRNPH3P31942 346 aaKnown RBP11.99□□□□□ -0.49
MED28-203ENST00000503945 TRIM23P36406 574 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 LSSP48449 732 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 CXADRP78310 365 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 SLC25A11Q02978 314 aaKnown RBP11.99□□□□□ -0.49
MED28-203ENST00000503945 PDK2Q15119 407 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 ISXQ2M1V0 245 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 ALG11Q2TAA5 492 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 ATP13A4Q4VNC1 1196 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 SPECC1LQ69YQ0 1117 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 GUSBP11Q6P575 273 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 ZNF605Q86T29 641 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 PLA2G15Q8NCC3 412 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 OR6C4Q8NGE1 309 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 OR56A4Q8NGH8 313 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 ZNF564Q8TBZ8 553 aaPredicted RBP11.99□□□□□ -0.49
MED28-203ENST00000503945 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 SCRN2Q96FV2 425 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 GPR34Q9UPC5 381 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 DGKBQ9Y6T7 804 aa11.99□□□□□ -0.49
MED28-203ENST00000503945 TCEA3O75764 348 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 MPOP05164 745 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 CR2P20023 1033 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 CCNCP24863 283 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 RBMS1P29558 406 aaKnown RBP11.98□□□□□ -0.49
MED28-203ENST00000503945 MAXP61244 160 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 RALGDSQ12967 914 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 ARHGEF7Q14155 803 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 SLC18A3Q16572 532 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 ANKRD20A8PQ5CZ79 823 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 ARMC12Q5T9G4 340 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 DENND2CQ68D51 928 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 TIGD7Q6NT04 549 aaPredicted RBP11.98□□□□□ -0.49
MED28-203ENST00000503945 RBM44Q6ZP01 1051 aaKnown RBP11.98□□□□□ -0.49
MED28-203ENST00000503945 TAF8Q7Z7C8 310 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 SLC35F3Q8IY50 421 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 PGBD5Q8N414 524 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 ARL10Q8N8L6 244 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 FAM46DQ8NEK8 389 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 FAM71BQ8TC56 605 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 FUBP1Q96AE4 644 aaKnown RBP11.98□□□□□ -0.49
MED28-203ENST00000503945 NSMCE3Q96MG7 304 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 ZNF578Q96N58 590 aaPredicted RBP11.98□□□□□ -0.49
MED28-203ENST00000503945 CCDC3Q9BQI4 270 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 MGME1Q9BQP7 344 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 MAK16Q9BXY0 300 aaKnown RBP11.98□□□□□ -0.49
MED28-203ENST00000503945 POLR1BQ9H9Y6 1135 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 NT5MQ9NPB1 228 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 SIRPGQ9P1W8 387 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 B4GALT6Q9UBX8 382 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 MOSPD1Q9UJG1 213 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 KIF26BQ2KJY2 2108 aa11.98□□□□□ -0.49
MED28-203ENST00000503945 FLNBO75369 2602 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms