RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CCDC173Q0VFZ6 552 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 KRT81Q14533 505 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 ACOX1Q15067 660 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 CNGA3Q16281 694 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 TBC1D25Q3MII6 688 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 DENND2CQ68D51 928 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 HSD11B1LQ7Z5J1 315 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 ATPAF2Q8N5M1 289 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 CCL4L1Q8NHW4 92 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-204ENST00000503215 FAM71BQ8TC56 605 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 NAF1Q96HR8 494 aaKnown RBP16.3■□□□□ 0.2
SCLT1-204ENST00000503215 COQ10AQ96MF6 247 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 EVA1BQ9NVM1 165 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 ENTPD2Q9Y5L3 495 aa16.3■□□□□ 0.2
SCLT1-204ENST00000503215 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-204ENST00000503215 FUCA1P04066 466 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 CTPS1P17812 591 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 LHCGRP22888 699 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 HTR1BP28222 390 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 TRIM23P36406 574 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 MMP13P45452 471 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 ABCG1P45844 678 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 LSSP48449 732 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 BLKP51451 505 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 PDX1P52945 283 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 POLR2LP62875 67 aaKnown RBP16.29■□□□□ 0.2
SCLT1-204ENST00000503215 COL9A2Q14055 689 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-204ENST00000503215 DPYSL3Q14195 570 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 ELOCQ15369 112 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 PNCKQ6P2M8 343 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 TSPAN33Q86UF1 283 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 CBARPQ8N350 705 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-204ENST00000503215 FSTL5Q8N475 847 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-204ENST00000503215 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCLT1-204ENST00000503215 PTCD2Q8WV60 388 aaKnown RBP16.29■□□□□ 0.2
SCLT1-204ENST00000503215 CCDC3Q9BQI4 270 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 TMEM168Q9H0V1 697 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 NT5MQ9NPB1 228 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 NCKIPSDQ9NZQ3 722 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 GPR34Q9UPC5 381 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 DOLKQ9UPQ8 538 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 SATB2Q9UPW6 733 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 SHROOM3Q8TF72 1996 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 LRP4O75096 1905 aa16.29■□□□□ 0.2
SCLT1-204ENST00000503215 NPIPB15A6NHN6 443 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-204ENST00000503215 HEXIM1O94992 359 aaKnown RBP16.28■□□□□ 0.2
SCLT1-204ENST00000503215 CPP00450 1065 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 TNFP01375 233 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 PDHA1P08559 390 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 HNRNPH3P31942 346 aaKnown RBP16.28■□□□□ 0.2
SCLT1-204ENST00000503215 VIPR1P32241 457 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 ACTN2P35609 894 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 RPIAP49247 311 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 KIAA1024LP59773 190 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 ASTE1Q2TB18 679 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-204ENST00000503215 MARC1Q5VT66 337 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 NCBP2-AS2Q69YL0 99 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 TEX26Q8N6G2 289 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 OR56A4Q8NGH8 313 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 SPOCK2Q92563 424 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 CCDC74AQ96AQ1 378 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 PRR11Q96HE9 360 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-204ENST00000503215 HIC2Q96JB3 615 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 RBM15Q96T37 977 aaKnown RBP eCLIP16.28■□□□□ 0.27e-8■■■■□ 26.4
SCLT1-204ENST00000503215 POLR1BQ9H9Y6 1135 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 ASCL3Q9NQ33 180 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 CTTNBP2NLQ9P2B4 639 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 DGKBQ9Y6T7 804 aa16.28■□□□□ 0.2
SCLT1-204ENST00000503215 FASNP49327 2511 aaKnown RBP16.28■□□□□ 0.2
SCLT1-204ENST00000503215 CACNB4O00305 520 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-204ENST00000503215 SOCS5O75159 536 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 PROSCO94903 275 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 PGLSO95336 258 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 ALPIP09923 528 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 HSPA9P38646 679 aaKnown RBP16.27■□□□□ 0.2
SCLT1-204ENST00000503215 ETV3P41162 512 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 CCL7P80098 99 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 GALNT2Q10471 571 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 SLC10A2Q12908 348 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-204ENST00000503215 ANKRD20A8PQ5CZ79 823 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 C3orf38Q5JPI3 329 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 ESRP1Q6NXG1 681 aaKnown RBP16.27■□□□□ 0.2
SCLT1-204ENST00000503215 LVRNQ6Q4G3 990 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 RBM44Q6ZP01 1051 aaKnown RBP16.27■□□□□ 0.2
SCLT1-204ENST00000503215 Q6ZVL8 140 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 B3GNT8Q7Z7M8 397 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 SPACA3Q8IXA5 215 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 PQLC3Q8N755 202 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 ARL10Q8N8L6 244 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 PIH1D2Q8WWB5 315 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 GLMNQ92990 594 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 NAT6Q93015 286 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 SEMA3CQ99985 751 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 PRORYQ9H606 182 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 SUDS3Q9H7L9 328 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-204ENST00000503215 SYNDIG1Q9H7V2 258 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 CYP4F12Q9HCS2 524 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 PHTF1Q9UMS5 762 aa16.27■□□□□ 0.2
SCLT1-204ENST00000503215 NTN3O00634 580 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms