RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 HIST2H2BCQ6DN03 193 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 HIST2H2BDQ6DRA6 164 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 FAM122CQ6P4D5 195 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 DSTYKQ6XUX3 929 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 HAPLN4Q86UW8 402 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 KCNH5Q8NCM2 988 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 BEST2Q8NFU1 509 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 MORC4Q8TE76 937 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 SECTM1Q8WVN6 248 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 TANKQ92844 425 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 USP13Q92995 863 aaPredicted RBP2.51□□□□□ -2.01
SMAD1-203ENST00000502342 KLHL15Q96M94 604 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 PKP4Q99569 1192 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 H2AFJQ9BTM1 129 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 PPP1R14DQ9NXH3 145 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 SLC25A10Q9UBX3 287 aaPredicted RBP2.51□□□□□ -2.01
SMAD1-203ENST00000502342 SIX4Q9UIU6 781 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 KCNG2Q9UJ96 466 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 POU2F3Q9UKI9 436 aa2.51□□□□□ -2.01
SMAD1-203ENST00000502342 TAF1P21675 1872 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 PDS5AQ29RF7 1337 aaKnown RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 IGHV4OR15-8A0A075B7B6 117 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 CCDC196A0A1B0GTZ2 297 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 CPED1A4D0V7 1026 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 LRRC53A6NM62 1247 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 LINC01565O15544 149 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 SEC14L5O43304 696 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 TPD52L2O43399 206 aaKnown RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 XPNPEP2O43895 674 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 LMX1BO60663 402 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 IGLV2-11P01706 119 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 AMD1P17707 334 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 AGAP20933 346 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 KCNA5P22460 613 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 DGKAP23743 735 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 EIF2S3P41091 472 aaKnown RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 CTCFP49711 727 aaPredicted RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 TUBP50607 506 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF132P52740 706 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 DLX5P56178 289 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 BRWD1-AS2P59051 145 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 VAMP2P63027 116 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 POU5F1BQ06416 359 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 NEXNQ0ZGT2 675 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 GALNT2Q10471 571 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 OASLQ15646 514 aaKnown RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 CTF1Q16619 201 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 EIF2S3LQ2VIR3 472 aaKnown RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 SLC9B1Q4ZJI4 515 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 SLC45A4Q5BKX6 768 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 SGO1Q5FBB7 561 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 PPP6R3Q5H9R7 873 aaPredicted RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 RGMBQ6NW40 437 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 ANKRD54Q6NXT1 300 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 LCTLQ6UWM7 567 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 GDPD4Q6W3E5 623 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 SLC36A4Q6YBV0 504 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 CCNI2Q6ZMN8 369 aaPredicted RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 USP43Q70EL4 1123 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 TUBA1AQ71U36 451 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF771Q7L3S4 317 aaPredicted RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 TAOK1Q7L7X3 1001 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 LINGO2Q7L985 606 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF329Q86UD4 541 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 SATL1Q86VE3 508 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 RFLNBQ8N5W9 214 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 ZBTB2Q8N680 514 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF441Q8N8Z8 693 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 HUS1BQ8NHY5 278 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 SORCS1Q8WY21 1168 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 FIG4Q92562 907 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 TMEM19Q96HH6 336 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 NODALQ96S42 347 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 TUBA1CQ9BQE3 449 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 FUZQ9BT04 418 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 EVA1AQ9H8M9 152 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 UBTD1Q9HAC8 227 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 C17orf75Q9HAS0 396 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 DDX4Q9NQI0 724 aaKnown RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF224Q9NZL3 707 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 HSPB7Q9UBY9 170 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 TTC7AQ9ULT0 858 aaPredicted RBP2.5□□□□□ -2.01
SMAD1-203ENST00000502342 ARHGAP26Q9UNA1 814 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 A4GNTQ9UNA3 340 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 PSAT1Q9Y617 370 aa2.5□□□□□ -2.01
SMAD1-203ENST00000502342 UTYO14607 1347 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 GREB1LQ9C091 1923 aaPredicted RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 TMEM202A6NGA9 273 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 AKR1B15C9JRZ8 316 aaPredicted RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 MID1O15344 667 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 HOXC11O43248 304 aaPredicted RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 PLRG1O43660 514 aaKnown RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 ATP1A1P05023 1023 aaKnown RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 CYC1P08574 325 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 LINC00271P0C7V0 271 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 SHMT1P34896 483 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 GABRB2P47870 512 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 CLCN3P51790 818 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 EFNA5P52803 228 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 ARL16Q0P5N6 197 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms