RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TICAM1Q8IUC6 712 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 SLC22A9Q8IVM8 553 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 ST13P4Q8IZP2 240 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 ARHGAP18Q8N392 663 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 ATP6V0D2Q8N8Y2 350 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 OR52K2Q8NGK3 314 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 GABPB2Q8TAK5 448 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 EXT2Q93063 718 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 FBXO32Q969P5 355 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 DNAJC1Q96KC8 554 aaKnown RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 B3GALT6Q96L58 329 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 LRGUKQ96M69 825 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 RPRD1AQ96P16 312 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 PKP2Q99959 881 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 SEMA3CQ99985 751 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 MRPL1Q9BYD6 325 aaKnown RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 PAPOLBQ9NRJ5 636 aaKnown RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 POLR3BQ9NW08 1133 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 CACNA2D2Q9NY47 1150 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 UTP6Q9NYH9 597 aaKnown RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 PCDHB5Q9Y5E4 795 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 THSD7BQ9C0I4 1608 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 C15orf38-AP3S2A0A0A6YYH1 394 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 ATP6AP2A0A1C7CYW4 349 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 TMEM189-UBE2V1I3L0A0 370 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 PSMD12O00232 456 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 TRIM38O00635 465 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 ATP6AP2O75787 350 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 SUPT7LO94864 414 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 GOT2P00505 430 aaKnown RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 PIRTP0C851 137 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 IMPDH1P20839 514 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 FDXRP22570 491 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 RPL26P61254 145 aaKnown RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 IL10RBQ08334 325 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 GALNT1Q10472 559 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 PDAP1Q13442 181 aaKnown RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 SERINC3Q13530 473 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 GALNT3Q14435 633 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 LIN52Q52LA3 116 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 AGKQ53H12 422 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 C10orf120Q5SQS8 335 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 RASIP1Q5U651 963 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 RGMBQ6NW40 437 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 SLC30A9Q6PML9 568 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 ARPINQ7Z6K5 226 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 AFAP1L2Q8N4X5 818 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 OR9I1Q8NGQ6 314 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 BLOC1S5Q8TDH9 187 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 DLG3Q92796 817 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 L3HYPDHQ96EM0 354 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 IL37Q9NZH6 218 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 MARCH2Q9P0N8 246 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 PCDHGB4Q9UN71 923 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 TRAF6Q9Y4K3 522 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 PCDHGB5Q9Y5G0 923 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 TANC1Q9C0D5 1861 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 SLC12A8A0AV02 714 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 FAM92AA1XBS5 289 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 DRGXA6NNA5 263 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 DNAJA2O60884 412 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 ABCB7O75027 752 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 IGLV3-27P01718 113 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 CD1DP15813 335 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 OR1E1P30953 314 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 CHN2P52757 468 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 CAP1Q01518 475 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 ACVR1Q04771 509 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 PRKCZQ05513 592 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 TAF10Q12962 218 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 RALGDSQ12967 914 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 CTXN3Q4LDR2 81 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 UNC50Q53HI1 259 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 NADSYN1Q6IA69 706 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 FAM45BPQ6NSW5 357 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 PAOXQ6QHF9 649 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 SAPCD2Q86UD0 394 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 SPATA24Q86W54 205 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 TMEM126BQ8IUX1 230 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 OR13C4Q8NGS5 318 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 FAM45AQ8TCE6 357 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 ASB9Q96DX5 294 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 C3orf30Q96M34 536 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 PCDHAC1Q9H158 963 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 CRISPLD1Q9H336 500 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 FBRSL1Q9HCM7 1045 aaKnown RBP9.87□□□□□ -0.83
CLIP1-204ENST00000501271 UBAP1Q9NZ09 502 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLIP1-204ENST00000501271 BCAP29Q9UHQ4 241 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 SLC27A5Q9Y2P5 690 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 ACTL7AQ9Y615 435 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 CCDC162PA2VCL2 907 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 PPP6CO00743 305 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 TRIM24O15164 1050 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 DENRO43583 198 aaKnown RBP9.87□□□□□ -0.83
CLIP1-204ENST00000501271 RNASEH2AO75792 299 aaKnown RBP9.87□□□□□ -0.83
CLIP1-204ENST00000501271 CRTAMO95727 393 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 SLC10A3P09131 477 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 PRSS56P0CW18 603 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms