RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 BUB1BO60566 1050 aaPredicted RBP13.98□□□□□ -0.17
CCDC58-207ENST00000498466 RAD1O60671 282 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 HOXC4P09017 264 aaPredicted RBP13.98□□□□□ -0.17
CCDC58-207ENST00000498466 ELFN1P0C7U0 828 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 CCNB1P14635 433 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 CD1CP29017 333 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 CSTF2P33240 577 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCDC58-207ENST00000498466 STAT1P42224 750 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 LIMK2P53671 638 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 HDAC4P56524 1084 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 YBEYP58557 167 aaPredicted RBP13.98□□□□□ -0.17
CCDC58-207ENST00000498466 SERINC3Q13530 473 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 CLPPQ16740 277 aaPredicted RBP13.98□□□□□ -0.17
CCDC58-207ENST00000498466 PARP15Q460N3 678 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 C4orf17Q53FE4 359 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 ZNF438Q7Z4V0 828 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 ZSWIM9Q86XI8 627 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 PYROXD2Q8N2H3 581 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 FAM26EQ8N5C1 309 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 PAF1Q8N7H5 531 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 AGBL5Q8NDL9 886 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 JOSD2Q8TAC2 188 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 LGR4Q9BXB1 951 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 CARS2Q9HA77 564 aaKnown RBP13.98□□□□□ -0.17
CCDC58-207ENST00000498466 SLC39A1Q9NY26 324 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 UNC13CQ8NB66 2214 aa13.98□□□□□ -0.17
CCDC58-207ENST00000498466 ZFC3H1O60293 1989 aaKnown RBP13.97□□□□□ -0.17
CCDC58-207ENST00000498466 CLEC18AA5D8T8 446 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 C2CD4BA6NLJ0 364 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 PDE2AO00408 941 aaPredicted RBP13.97□□□□□ -0.17
CCDC58-207ENST00000498466 ECEL1O95672 775 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 FGF1P05230 155 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 PRKAR1AP10644 381 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 MPSTP25325 297 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 SERPINA4P29622 427 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 TRIM23P36406 574 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 PTPN9P43378 593 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 ILF3Q12906 894 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC58-207ENST00000498466 RALGDSQ12967 914 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 TRA2AQ13595 282 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC58-207ENST00000498466 NR1D2Q14995 579 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 MAN2A1Q16706 1144 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 TPD52L1Q16890 204 aaPredicted RBP13.97□□□□□ -0.17
CCDC58-207ENST00000498466 NKAIN2Q5VXU1 208 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 CLEC18BQ6UXF7 455 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 LIPIQ6XZB0 460 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 SLFN11Q7Z7L1 901 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 C17orf82Q86X59 251 aaPredicted RBP13.97□□□□□ -0.17
CCDC58-207ENST00000498466 FAM129CQ86XR2 697 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 CLEC18CQ8NCF0 446 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 NTAN1Q96AB6 310 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 TUBGCP5Q96RT8 1024 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 DDA1Q9BW61 102 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 GSDMCQ9BYG8 508 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 ASPSCR1Q9BZE9 553 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 ZMYND15Q9H091 742 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 ATP13A3Q9H7F0 1226 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 TAAR2Q9P1P5 351 aa13.97□□□□□ -0.17
CCDC58-207ENST00000498466 LRRK2Q5S007 2527 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 A8MX80 341 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 CAPN5O15484 640 aaPredicted RBP13.96□□□□□ -0.17
CCDC58-207ENST00000498466 NKX2-8O15522 239 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 CREB3O43889 395 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 PRKCSHP14314 528 aaPredicted RBP13.96□□□□□ -0.17
CCDC58-207ENST00000498466 MMP8P22894 467 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 GPR3P46089 330 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 ACOX1Q15067 660 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 DCAF12Q5T6F0 453 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 KLHDC7AQ5VTJ3 777 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 DPY19L2P1Q6NXN4 242 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 PNCKQ6P2M8 343 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 SLC30A9Q6PML9 568 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 NRROSQ86YC3 692 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 NRSN1Q8IZ57 195 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 OR4D9Q8NGE8 314 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 EPS8L1Q8TE68 723 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 CENPIQ92674 756 aaPredicted RBP13.96□□□□□ -0.17
CCDC58-207ENST00000498466 KIAA1143Q96AT1 154 aaPredicted RBP13.96□□□□□ -0.17
CCDC58-207ENST00000498466 SLC45A3Q96JT2 553 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 PSMG3-AS1Q96PY0 264 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 C11orf70Q9BRQ4 267 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 NDST4Q9H3R1 872 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 CATSPERBQ9H7T0 1116 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 GPN2Q9H9Y4 310 aaPredicted RBP13.96□□□□□ -0.17
CCDC58-207ENST00000498466 PLAAQ9Y263 795 aa13.96□□□□□ -0.17
CCDC58-207ENST00000498466 SDK2Q58EX2 2172 aa13.96□□□□□ -0.18
CCDC58-207ENST00000498466 UTP20O75691 2785 aaKnown RBP13.95□□□□□ -0.18
CCDC58-207ENST00000498466 BLACEA4D250 179 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 EFCAB7A8K855 629 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 J3KR12 359 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 PES1O00541 588 aaKnown RBP13.95□□□□□ -0.18
CCDC58-207ENST00000498466 THRAP10827 490 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 KRT3P12035 628 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 MYCLP1P12525 358 aaPredicted RBP13.95□□□□□ -0.18
CCDC58-207ENST00000498466 AK4P27144 223 aaPredicted RBP13.95□□□□□ -0.18
CCDC58-207ENST00000498466 GNPDA1P46926 289 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 PPM1FP49593 454 aaPredicted RBP13.95□□□□□ -0.18
CCDC58-207ENST00000498466 VWA3BQ502W6 1294 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 ANKS6Q68DC2 871 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 SCYL2Q6P3W7 929 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms