RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 PATE1Q8WXA2 126 aa16.53■□□□□ 0.24
VIM-208ENST00000497849 STARD8Q92502 1023 aa16.53■□□□□ 0.24
VIM-208ENST00000497849 SHC3Q92529 594 aa16.53■□□□□ 0.24
VIM-208ENST00000497849 KIAA1143Q96AT1 154 aaPredicted RBP16.53■□□□□ 0.24
VIM-208ENST00000497849 DHTKD1Q96HY7 919 aaPredicted RBP16.53■□□□□ 0.24
VIM-208ENST00000497849 CFAP57Q96MR6 1250 aa16.53■□□□□ 0.24
VIM-208ENST00000497849 MAGEB5Q9BZ81 275 aa16.53■□□□□ 0.24
VIM-208ENST00000497849 RAB6CQ9H0N0 254 aa16.53■□□□□ 0.24
VIM-208ENST00000497849 TMEM51Q9NW97 253 aa16.53■□□□□ 0.24
VIM-208ENST00000497849 KCNMB2Q9Y691 235 aa16.53■□□□□ 0.24
VIM-208ENST00000497849 IGHV1OR21-1A0A087WYE8 117 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 A1L4Q6 167 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 FAM72CH0Y354 149 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 PPM1DO15297 605 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 BUB1O43683 1085 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 RAMP2O60895 175 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 VPS4BO75351 444 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 HOXC4P09017 264 aaPredicted RBP16.52■□□□□ 0.24
VIM-208ENST00000497849 KELP23276 732 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 TRIM23P36406 574 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 SCNN1AP37088 669 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 STAT1P42224 750 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 GPR3P46089 330 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 MARSP56192 900 aaKnown RBP16.52■□□□□ 0.24
VIM-208ENST00000497849 RAB15P59190 212 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 RHOAP61586 193 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 NRG1Q02297 640 aaPredicted RBP16.52■□□□□ 0.24
VIM-208ENST00000497849 CRTC2Q53ET0 693 aaPredicted RBP16.52■□□□□ 0.24
VIM-208ENST00000497849 FAM102AQ5T9C2 384 aaPredicted RBP16.52■□□□□ 0.24
VIM-208ENST00000497849 FAM72AQ5TYM5 149 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 FAM72DQ6L9T8 149 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 RWDD4Q6NW29 188 aaKnown RBP16.52■□□□□ 0.24
VIM-208ENST00000497849 C16orf46Q6P387 395 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 FAM72BQ86X60 149 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 FAM129CQ86XR2 697 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 NRSN1Q8IZ57 195 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 PELI3Q8N2H9 469 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 GALNT11Q8NCW6 608 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 EXOC2Q96KP1 924 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 CTRCQ99895 268 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 CRACR2AQ9BSW2 395 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 EFHD1Q9BUP0 239 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 KLC2Q9H0B6 622 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 CLSTN2Q9H4D0 955 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 PRDM8Q9NQV8 689 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 OR12D3Q9UGF7 316 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 MOSPD1Q9UJG1 213 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 VPS4AQ9UN37 437 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.52■□□□□ 0.24
VIM-208ENST00000497849 ST14Q9Y5Y6 855 aa16.52■□□□□ 0.24
VIM-208ENST00000497849 FBN2P35556 2912 aa16.52■□□□□ 0.23
VIM-208ENST00000497849 PRSS38A1L453 326 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 ZW10O43264 779 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 RECQL5O94762 991 aaPredicted RBP16.51■□□□□ 0.23
VIM-208ENST00000497849 FUCA1P04066 466 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 GM2AP17900 193 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 SLC9A1P19634 815 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 TCN2P20062 427 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 COL8A1P27658 744 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 KRT9P35527 623 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 GABRB2P47870 512 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 ABHD18Q0P651 414 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 RALGDSQ12967 914 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 INO80DQ53TQ3 878 aaPredicted RBP16.51■□□□□ 0.23
VIM-208ENST00000497849 SLC47A2Q86VL8 602 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 XYLT1Q86Y38 959 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 NAGSQ8N159 534 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 CCDC34Q96HJ3 373 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 TEFMQ96QE5 360 aaKnown RBP16.51■□□□□ 0.23
VIM-208ENST00000497849 SUV39H2Q9H5I1 410 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 RETREG1Q9H6L5 497 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 NOL6Q9H6R4 1146 aaKnown RBP16.51■□□□□ 0.23
VIM-208ENST00000497849 TAAR2Q9P1P5 351 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 PDP2Q9P2J9 529 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 LHX3Q9UBR4 397 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 TMEM59LQ9UK28 342 aa16.51■□□□□ 0.23
VIM-208ENST00000497849 MRPS18BQ9Y676 258 aaKnown RBP16.51■□□□□ 0.23
VIM-208ENST00000497849 PRRC2CQ9Y520 2896 aaKnown RBP16.51■□□□□ 0.23
VIM-208ENST00000497849 FAM170AA1A519 330 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 ZSCAN5CA6NGD5 496 aaPredicted RBP16.5■□□□□ 0.23
VIM-208ENST00000497849 BIN1O00499 593 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 LRIG2O94898 1065 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 AK4P27144 223 aaPredicted RBP16.5■□□□□ 0.23
VIM-208ENST00000497849 CLCN1P35523 988 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 MC1RQ01726 317 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 PTK2Q05397 1052 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 TSR1Q2NL82 804 aaKnown RBP16.5■□□□□ 0.23
VIM-208ENST00000497849 C2CD6Q53TS8 623 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 ERAP2Q6P179 960 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 TMEM71Q6P5X7 295 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 ASB18Q6ZVZ8 466 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 CCDC13Q8IYE1 715 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 CASKIN2Q8WXE0 1202 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 SMARCE1Q969G3 411 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 FAM81BQ96LP2 452 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 CARS2Q9HA77 564 aaKnown RBP16.5■□□□□ 0.23
VIM-208ENST00000497849 AJAP1Q9UKB5 411 aaPredicted RBP16.5■□□□□ 0.23
VIM-208ENST00000497849 SRPK3Q9UPE1 567 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 ATP8A1Q9Y2Q0 1164 aa16.5■□□□□ 0.23
VIM-208ENST00000497849 TMEM184BQ9Y519 407 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms