RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 AURKAO14965 403 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 EIF3HO15372 352 aaKnown RBP eCLIP13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 SLC7A4O43246 635 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 AP1G1O43747 822 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 IGLV3-19P01714 112 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 CYP2A6P11509 494 aaPredicted RBP13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 NFKBIAP25963 317 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 VIPR1P32241 457 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 TPMTP51580 245 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 FAM193AP78312 1265 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 CRADDP78560 199 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 SEMG2Q02383 582 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 CCDC15Q0P6D6 951 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 ELP6Q0PNE2 266 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 SFSWAPQ12872 951 aaKnown RBP13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 RALGDSQ12967 914 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 PDIA2Q13087 525 aaKnown RBP13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 BBS9Q3SYG4 887 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 HP1BP3Q5SSJ5 553 aaPredicted RBP13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 DENND2CQ68D51 928 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 CRTC1Q6UUV9 634 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 CENPUQ71F23 418 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 TSPAN33Q86UF1 283 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 PGBD3Q8N328 593 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 TTC30BQ8N4P2 665 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 FBXL6Q8N531 539 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 BRSK1Q8TDC3 778 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 LRRC39Q96DD0 335 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 WDR83Q9BRX9 315 aaKnown RBP13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 TRABDQ9H4I3 376 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 SPATA6Q9NWH7 488 aaPredicted RBP13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 GGT7Q9UJ14 662 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 ITM2BQ9Y287 266 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 FADS3Q9Y5Q0 445 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 TEX264Q9Y6I9 313 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 FANCMQ8IYD8 2048 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 SPAG17Q6Q759 2223 aa13.99□□□□□ -0.17
ATPAF2-208ENST00000496852 A0A0U1RQS6 177 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 PLRG1O43660 514 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 LDB2O43679 373 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 H2AFXP16104 143 aaPredicted RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ADRA1DP25100 572 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 FASTKD3Q14CZ7 662 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 TMEM52BQ4KMG9 183 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 DNAJC21Q5F1R6 531 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 PCID2Q5JVF3 399 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ARMC3Q5W041 872 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ERAP2Q6P179 960 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 EMBQ6PCB8 327 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 LYSMD3Q7Z3D4 306 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 GLT6D1Q7Z4J2 308 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 AENQ8WTP8 325 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 EID2BQ96D98 161 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 COL25A1Q9BXS0 654 aaPredicted RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 TSPYL1Q9H0U9 437 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 SAYSD1Q9NPB0 183 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 PRMT8Q9NR22 394 aaPredicted RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 NCKAP1Q9Y2A7 1128 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 TCAF1Q9Y4C2 921 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 TNRC6BQ9UPQ9 1833 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 A0A0C4DFX4 3053 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 C1orf232A0A0U1RR37 186 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 HEATR9A2RTY3 570 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 MROH6A6NGR9 719 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 A8MX80 341 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 CLDN7O95471 211 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ZNF30P17039 623 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ELK3P41970 407 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ADPRHP54922 357 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 TP53BP1Q12888 1972 aaPredicted RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 TAF1AQ15573 450 aaPredicted RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 CNGA3Q16281 694 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 CCDC38Q502W7 563 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 LRRC66Q68CR7 880 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 TMC3Q7Z5M5 1100 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 RELL1Q8IUW5 271 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 IGDCC3Q8IVU1 814 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 CBARPQ8N350 705 aaPredicted RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 PPHLN1Q8NEY8 458 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 GANCQ8TET4 914 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 PTCD2Q8WV60 388 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 UBLCP1Q8WVY7 318 aaPredicted RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ANKRD7Q92527 254 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 KIFC1Q9BW19 673 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 TPSD1Q9BZJ3 242 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ZFYVE1Q9HBF4 777 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 MRM3Q9HC36 420 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 SOX13Q9UN79 622 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 CHMP2BQ9UQN3 213 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ARL5AQ9Y689 179 aa13.98□□□□□ -0.17
ATPAF2-208ENST00000496852 ABCA7Q8IZY2 2146 aa13.97□□□□□ -0.17
ATPAF2-208ENST00000496852 H0Y858 1186 aa13.97□□□□□ -0.17
ATPAF2-208ENST00000496852 TSPAN6O43657 245 aa13.97□□□□□ -0.17
ATPAF2-208ENST00000496852 CRTAMO95727 393 aa13.97□□□□□ -0.17
ATPAF2-208ENST00000496852 TDGF1P13385 188 aa13.97□□□□□ -0.17
ATPAF2-208ENST00000496852 HOXA6P31267 233 aa13.97□□□□□ -0.17
ATPAF2-208ENST00000496852 HMGCLP35914 325 aa13.97□□□□□ -0.17
ATPAF2-208ENST00000496852 PXNP49023 591 aaPredicted RBP13.97□□□□□ -0.17
ATPAF2-208ENST00000496852 PMS2P54278 862 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms