RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 IGFALSP35858 605 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 GRK6P43250 576 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 NOVA1P51513 510 aaKnown RBP19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 PFN3P60673 137 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 WASHC5Q12768 1159 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 MTM1Q13496 603 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 GSE1Q14687 1217 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 ACOX1Q15067 660 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 IRF4Q15306 451 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 DARS2Q6PI48 645 aaKnown RBP19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 B4GALNT4Q76KP1 1039 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 SPATS2Q86XZ4 545 aaKnown RBP19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 NAXDQ8IW45 347 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 RAVER1Q8IY67 606 aaKnown RBP19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 ATL2Q8NHH9 583 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 PPP1R2P1Q96PQ5 205 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 SRPK1Q96SB4 655 aaKnown RBP19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 RBM15Q96T37 977 aaKnown RBP eCLIP19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 HERPUD2Q9BSE4 406 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 FRMD8P1Q9BZ68 369 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 GPR27Q9NS67 375 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 COQ6Q9Y2Z9 468 aa19.3■□□□□ 0.68
CTDSP1-213ENST00000496785 SPTY2D1-AS1A0A0U1RR47 76 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 NPIPB15A6NHN6 443 aaPredicted RBP19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 H3BM21 787 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 ITGAVP06756 1048 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 HTR1BP28222 390 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 RBL1P28749 1068 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 EPHA8P29322 1005 aaPredicted RBP19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 PDE1CQ14123 709 aaPredicted RBP19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 CNGA3Q16281 694 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 WSCD2Q2TBF2 565 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 AADACL2Q6P093 401 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 PIP4P1Q86T03 277 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 PARGQ86W56 976 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 ZNF567Q8N184 647 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 NUS1Q96E22 293 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 FCRL5Q96RD9 977 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 LYSMD1Q96S90 227 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 MLPHQ9BV36 600 aaPredicted RBP19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 FAM153AQ9UHL3 310 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 RSPH14Q9UHP6 348 aa19.29■□□□□ 0.68
CTDSP1-213ENST00000496785 A8MX80 341 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 ANKRD66B4E2M5 251 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 KCNK3O14649 394 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 KCNK5O95279 499 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 CTPS1P17812 591 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 NFKB1P19838 968 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 KCNA4P22459 653 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 HNF1BP35680 557 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 SEMG2Q02383 582 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 CDK18Q07002 472 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 KLF1Q13351 362 aaPredicted RBP19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 PPM1JQ5JR12 505 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 DBX2Q6ZNG2 339 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 SETD7Q8WTS6 366 aaKnown RBP19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 MAIP1Q8WWC4 291 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 TADA1Q96BN2 335 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 LRRC45Q96CN5 670 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 COQ10AQ96MF6 247 aa19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 MBNL1Q9NR56 388 aaKnown RBP19.28■□□□□ 0.68
CTDSP1-213ENST00000496785 DMXL1Q9Y485 3027 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 TP53BP1Q12888 1972 aaPredicted RBP19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 KCNN4O15554 427 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 SH3BP5O60239 455 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 ANXA9O76027 345 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 PRLP01236 227 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 PCCBP05166 539 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 ALPIP09923 528 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 LHCGRP22888 699 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 KELP23276 732 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 HNRNPKP61978 463 aaKnown RBP eCLIP19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 MPP3Q13368 585 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 PCSK7Q16549 785 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 ESRP1Q6NXG1 681 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 MACC1Q6ZN28 852 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 SLC22A18ASQ8N1D0 253 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 DEFB124Q8NES8 71 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 CCHCR1Q8TD31 782 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 BTN2A2Q8WVV5 523 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 DTD2Q96FN9 168 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 CDC6Q99741 560 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 GBA3Q9H227 469 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 DOCK9Q9BZ29 2069 aa19.27■□□□□ 0.68
CTDSP1-213ENST00000496785 CACNB4O00305 520 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 PDE2AO00408 941 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 NDST3O95803 873 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 EPOP01588 193 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 PYGLP06737 847 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 TSHRP16473 764 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 GEMP55040 296 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 IL9RQ01113 521 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 PRPSAP1Q14558 356 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 IHHQ14623 411 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 QPCTQ16769 361 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 HS1BP3Q53T59 392 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 PRAMEF14Q5SWL7 426 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 LRRC66Q68CR7 880 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 DENND2CQ68D51 928 aa19.26■□□□□ 0.67
CTDSP1-213ENST00000496785 PSAPL1Q6NUJ1 521 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms