RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CA4P22748 312 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 CES1P23141 567 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 KELP23276 732 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 VIPR1P32241 457 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 RPIAP49247 311 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 ADKP55263 362 aaKnown RBP15.77■□□□□ 0.12
HDAC4-213ENST00000496347 MAXP61244 160 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 SEMG2Q02383 582 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 TARDBPQ13148 414 aaKnown RBP eCLIP15.77■□□□□ 0.12
HDAC4-213ENST00000496347 ELOCQ15369 112 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 NR0B2Q15466 257 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 CNGA3Q16281 694 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 DEFB133Q30KQ1 61 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 ZFYVE27Q5T4F4 411 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 ARMC12Q5T9G4 340 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 FAXCQ5TGI0 409 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 LRRC38Q5VT99 294 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 LVRNQ6Q4G3 990 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 CPNE8Q86YQ8 564 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 SLC35G2Q8TBE7 412 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 IFI44Q8TCB0 444 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 PDCD6IPQ8WUM4 868 aaKnown RBP15.77■□□□□ 0.12
HDAC4-213ENST00000496347 NUS1Q96E22 293 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 TSGA13Q96PP4 275 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 CHP1Q99653 195 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 APOOQ9BUR5 198 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 TCEAL2Q9H3H9 227 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-213ENST00000496347 WDR26Q9H7D7 661 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 NT5MQ9NPB1 228 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 LRRD1A4D1F6 860 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 MATN3O15232 486 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 OPA1O60313 960 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 GCATO75600 419 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 ANXA6P08133 673 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 TSHRP16473 764 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 GM2AP17900 193 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 CCNCP24863 283 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 CLDN6P56747 220 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 SRP54P61011 504 aaKnown RBP15.76■□□□□ 0.11
HDAC4-213ENST00000496347 GBE1Q04446 702 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 TBX2Q13207 712 aaPredicted RBP15.76■□□□□ 0.11
HDAC4-213ENST00000496347 MESDQ14696 234 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 ACOX1Q15067 660 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 TCEAL1Q15170 157 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 ATP13A4Q4VNC1 1196 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 CDCP2Q5VXM1 449 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 HID1Q8IV36 788 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 PQLC3Q8N755 202 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 ARL10Q8N8L6 244 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 SCG3Q8WXD2 468 aaKnown RBP15.76■□□□□ 0.11
HDAC4-213ENST00000496347 PDXPQ96GD0 296 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 COQ10AQ96MF6 247 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 DEPDC7Q96QD5 511 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 SEMA3CQ99985 751 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 DNPEPQ9ULA0 475 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 CACNA1GO43497 2377 aa15.76■□□□□ 0.11
HDAC4-213ENST00000496347 TTC24A2A3L6 582 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-213ENST00000496347 EME2A4GXA9 379 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-213ENST00000496347 NPIPB15A6NHN6 443 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-213ENST00000496347 TNFRSF10CO14798 259 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 MYCLP1P12525 358 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-213ENST00000496347 LHCGRP22888 699 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 KDELR1P24390 212 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 TRIM23P36406 574 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 SLC1A1P43005 524 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 CYP4F3Q08477 520 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 RTP5Q14D33 572 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 CDKN3Q16667 212 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 GUSBP11Q6P575 273 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 ENPP7Q6UWV6 458 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 SLC35F3Q8IY50 421 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 NDUFAF2Q8N183 169 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 PLA2G15Q8NCC3 412 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 OR56A4Q8NGH8 313 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 MAPK15Q8TD08 544 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 RAPGEF5Q92565 580 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 FUBP1Q96AE4 644 aaKnown RBP15.75■□□□□ 0.11
HDAC4-213ENST00000496347 DTD2Q96FN9 168 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 SCRN2Q96FV2 425 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 RBM15Q96T37 977 aaKnown RBP eCLIP15.75■□□□□ 0.11
HDAC4-213ENST00000496347 TDRD1Q9BXT4 1180 aaKnown RBP15.75■□□□□ 0.11
HDAC4-213ENST00000496347 DTLQ9NZJ0 730 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 DOLKQ9UPQ8 538 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 PPIL1Q9Y3C6 166 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 RAI2Q9Y5P3 530 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 IGSF10Q6WRI0 2623 aa15.75■□□□□ 0.11
HDAC4-213ENST00000496347 PTPRQQ9UMZ3 2332 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 ARHGEF17Q96PE2 2063 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-213ENST00000496347 PDE2AO00408 941 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-213ENST00000496347 FZD6O60353 706 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 MT-CO3P00414 261 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 CTSEP14091 401 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 CCNB1P14635 433 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 TEAD1P28347 426 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 RPL26P61254 145 aaKnown RBP15.74■□□□□ 0.11
HDAC4-213ENST00000496347 PPIDQ08752 370 aaKnown RBP15.74■□□□□ 0.11
HDAC4-213ENST00000496347 ARHGEF7Q14155 803 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 SLC9A4Q6AI14 798 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 PNCKQ6P2M8 343 aa15.74■□□□□ 0.11
HDAC4-213ENST00000496347 EFL1Q7Z2Z2 1120 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms