RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 TTC30BQ8N4P2 665 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 BLOC1S5Q8TDH9 187 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 KLK6Q92876 244 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 RAB7BQ96AH8 199 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 LYSMD1Q96S90 227 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 TRIM56Q9BRZ2 755 aaKnown RBP13.53□□□□□ -0.24
PTPN7-218ENST00000496197 GPR174Q9BXC1 333 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 RAB17Q9H0T7 212 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 EBF2Q9HAK2 575 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 EPB41L5Q9HCM4 733 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 GOLGA6AQ9NYA3 693 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.53□□□□□ -0.24
PTPN7-218ENST00000496197 UTP11Q9Y3A2 253 aaKnown RBP13.53□□□□□ -0.24
PTPN7-218ENST00000496197 ZNF711Q9Y462 761 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 KCTD3Q9Y597 815 aa13.53□□□□□ -0.24
PTPN7-218ENST00000496197 V9GYY5 206 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-218ENST00000496197 HRO43593 1189 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 RNGTTO60942 597 aaKnown RBP13.52□□□□□ -0.25
PTPN7-218ENST00000496197 SEMA4FO95754 770 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 SLC4A1P02730 911 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 ECHS1P30084 290 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 VIPR1P32241 457 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 MAGEA3P43357 314 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 LIG3P49916 1009 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 SESN2P58004 480 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-218ENST00000496197 PTSQ03393 145 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 CDH17Q12864 832 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 POU6F1Q14863 301 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 CCDC38Q502W7 563 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 GLE1Q53GS7 698 aaKnown RBP13.52□□□□□ -0.25
PTPN7-218ENST00000496197 LRRC8BQ6P9F7 803 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 HSD11B1LQ7Z5J1 315 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 LINC00523Q86TU6 105 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 HOOK3Q86VS8 718 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 CBARPQ8N350 705 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-218ENST00000496197 DNAAF3Q8N9W5 541 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 MCUQ8NE86 351 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 PRSS33Q8NF86 280 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 FBXO25Q8TCJ0 367 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 ART4Q93070 314 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 WDR83Q9BRX9 315 aaKnown RBP13.52□□□□□ -0.25
PTPN7-218ENST00000496197 SGK2Q9HBY8 427 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 MAGEE1Q9HCI5 957 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 WHRNQ9P202 907 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 ARL5AQ9Y689 179 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 SLCO1B1Q9Y6L6 691 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 SPAG17Q6Q759 2223 aa13.52□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3DA0A087WVF3 549 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3IA0A087WXS9 549 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3EA0A087X179 549 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3KA0A087X1G2 549 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 C1orf232A0A0U1RR37 186 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 A0A1W2PQU0 124 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 CCDC78A2IDD5 438 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3FA6NER0 549 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-218ENST00000496197 IGLON5A6NGN9 336 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3LB9A6J9 549 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 PCDH8O95206 1070 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 IGHV4-34P06331 123 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3HP0C7X1 549 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 C6P13671 934 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 MGAT1P26572 445 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 MAT2AP31153 395 aaKnown RBP13.51□□□□□ -0.25
PTPN7-218ENST00000496197 CDK16Q00536 496 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 ELP6Q0PNE2 266 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 NAA30Q147X3 362 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-218ENST00000496197 MORF4L2Q15014 288 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 ZNF528Q3MIS6 628 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TMEM259Q4ZIN3 620 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 USP39Q53GS9 565 aaKnown RBP13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3GQ6DHY5 549 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3CQ6IPX1 549 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 ERAP2Q6P179 960 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 PCGF5Q86SE9 256 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 SLC41A1Q8IVJ1 513 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 TBC1D3Q8IZP1 549 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-218ENST00000496197 PELI3Q8N2H9 469 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 ZBTB44Q8NCP5 570 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 OR2T34Q8NGX1 318 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 ZNF778Q96MU6 729 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 ANKZF1Q9H8Y5 726 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 ZDHHC18Q9NUE0 388 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 SYBUQ9NX95 663 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 ANAPC5Q9UJX4 755 aa13.51□□□□□ -0.25
PTPN7-218ENST00000496197 DMDP11532 3685 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 MYO15AQ9UKN7 3530 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 H0Y858 1186 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 NEMP1O14524 444 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 TSPAN6O43657 245 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 LDB2O43679 373 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 ELFN1P0C7U0 828 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 CYP2A6P11509 494 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-218ENST00000496197 OXTRP30559 389 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 CARSP49589 748 aaKnown RBP13.5□□□□□ -0.25
PTPN7-218ENST00000496197 SUOXP51687 545 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 DRG2P55039 364 aaKnown RBP13.5□□□□□ -0.25
PTPN7-218ENST00000496197 PLTPP55058 493 aa13.5□□□□□ -0.25
PTPN7-218ENST00000496197 TCF15Q12870 199 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms