RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 OAZ2O95190 189 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 EGR2P11161 476 aaPredicted RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 MYF5P13349 255 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 ITGALP20701 1170 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 CMA1P23946 247 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 LRPAP1P30533 357 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 LONP1P36776 959 aaKnown RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 UBA7P41226 1012 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 PXNP49023 591 aaPredicted RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 SLC11A2P49281 568 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 ARFIP2P53365 341 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 UBE2HP62256 183 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 YWHAHQ04917 246 aaPredicted RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 KLF10Q13118 480 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 GPR17Q13304 367 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 DMP1Q13316 513 aaPredicted RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 SEMA5AQ13591 1074 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 POLD3Q15054 466 aaPredicted RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 PON2Q15165 354 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 SF3A2Q15428 464 aaKnown RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 ZBTB6Q15916 424 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 CCDC6Q16204 474 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 CNGA2Q16280 664 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 RESP18Q5W5W9 173 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 LMBRD2Q68DH5 695 aaPredicted RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 CENPPQ6IPU0 288 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 C1orf228Q6PIY5 440 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 SHC4Q6S5L8 630 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 MICALCLQ6ZW33 695 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 C1orf186Q6ZWK4 172 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 DNAJB7Q7Z6W7 309 aaPredicted RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 WDR5BQ86VZ2 330 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 RALGPS2Q86X27 583 aaPredicted RBP6.82□□□□□ -1.32
VIM-207ENST00000495528 ATAD1Q8NBU5 361 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 MSANTD3Q96H12 275 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 RAB34Q9BZG1 259 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 LRRC27Q9C0I9 530 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 ARRDC1-AS1Q9H2J1 176 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 KIAA1586Q9HCI6 787 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 INTS13Q9NVM9 706 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 KMT2BQ9UMN6 2715 aaPredicted RBP6.81□□□□□ -1.32
VIM-207ENST00000495528 ZFHX4Q86UP3 3567 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 TTC26A0AVF1 554 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 MTMR11A4FU01 709 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 OR6C75A6NL08 312 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 LACTBL1A8MY62 500 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 E7ENX8 843 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 PPEF2O14830 753 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 DCLK1O15075 740 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 POLR2DO15514 142 aaKnown RBP6.81□□□□□ -1.32
VIM-207ENST00000495528 EXTL3O43909 919 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 PRAMEF12O95522 483 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 CXCL8P10145 99 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 GABRR2P28476 465 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 HOXA6P31267 233 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 TNFSF9P41273 254 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 AARSP49588 968 aaKnown RBP eCLIP6.81□□□□□ -1.32
VIM-207ENST00000495528 NDUFA8P51970 172 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 ZNF134P52741 427 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 TBX4P57082 545 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 LILRA4P59901 499 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 TAP2Q03519 686 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 PLD1Q13393 1074 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 AASDHQ4L235 1098 aaPredicted RBP6.81□□□□□ -1.32
VIM-207ENST00000495528 C3orf38Q5JPI3 329 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 ABHD17BQ5VST6 288 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 KRT79Q5XKE5 535 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 SP5Q6BEB4 398 aaPredicted RBP6.81□□□□□ -1.32
VIM-207ENST00000495528 IL31Q6EBC2 164 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 LAYNQ6UX15 382 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 TMEM108Q6UXF1 575 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 DSTYKQ6XUX3 929 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 PDILTQ8N807 584 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 SLC16A11Q8NCK7 471 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 TMEM161BQ8NDZ6 487 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 RASSF8Q8NHQ8 419 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 GPT2Q8TD30 523 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 BPIFB1Q8TDL5 484 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 MAML1Q92585 1016 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 PSMG2Q969U7 264 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 APIPQ96GX9 242 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 HEPHQ9BQS7 1158 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 MMTAG2Q9BU76 263 aaKnown RBP6.81□□□□□ -1.32
VIM-207ENST00000495528 SPATA5L1Q9BVQ7 753 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 SARGQ9BW04 601 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 GOLPH3LQ9H4A5 285 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 C17orf75Q9HAS0 396 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 PLEKHA5Q9HAU0 1116 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 RALYQ9UKM9 306 aaKnown RBP6.81□□□□□ -1.32
VIM-207ENST00000495528 MORC2Q9Y6X9 1032 aaPredicted RBP6.81□□□□□ -1.32
VIM-207ENST00000495528 SDK1Q7Z5N4 2213 aa6.81□□□□□ -1.32
VIM-207ENST00000495528 TRIP11Q15643 1979 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 A0A0B4J269 797 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 CLDN3O15551 220 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 KRT18P05783 430 aaKnown RBP6.8□□□□□ -1.32
VIM-207ENST00000495528 COL4A2P08572 1712 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 CLTAP09496 248 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 ZNF806P0C7X5 589 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 PFKFB1P16118 471 aa6.8□□□□□ -1.32
VIM-207ENST00000495528 PPP3CBP16298 524 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms