RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CCDC121Q6ZUS5 278 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 SH2D5Q6ZV89 423 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 RAPH1Q70E73 1250 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 GLT6D1Q7Z4J2 308 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 YTHDF3Q7Z739 585 aaKnown RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 NUDCD3Q8IVD9 361 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 SYNPOQ8N3V7 929 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 DCLK2Q8N568 766 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 GBP7Q8N8V2 638 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 C2CD4AQ8NCU7 369 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 OR6P1Q8NGX9 317 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 BLOC1S5Q8TDH9 187 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 ZNF75CPQ92670 426 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 ISL2Q96A47 359 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 ISG20Q96AZ6 181 aaKnown RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 NECAB3Q96P71 396 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 FAM111AQ96PZ2 611 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 KLF6Q99612 283 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 TTC1Q99614 292 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 GPR22Q99680 433 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 ELAC2Q9BQ52 826 aaKnown RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 TDRD1Q9BXT4 1180 aaKnown RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 MFSD1Q9H3U5 465 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 FAM96AQ9H5X1 160 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 NOD2Q9HC29 1040 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 MLXIPLQ9NP71 852 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 CD320Q9NPF0 282 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 ARHGEF3Q9NR81 526 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 SPHK2Q9NRA0 654 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 MARK1Q9P0L2 795 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 VPS51Q9UID3 782 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 FBXO5Q9UKT4 447 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 CCL26Q9Y258 94 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 A0A087X1B8 175 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 FOXO6A8MYZ6 492 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ANKRD66B4E2M5 251 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 NRG2O14511 850 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 TPP1O14773 563 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 UGT1A9O60656 530 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 GPR37L1O60883 481 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 SOCS5O75159 536 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ZMPSTE24O75844 475 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 DHRS4L1P0CG22 281 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 STMN1P16949 149 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 TAC1P20366 129 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 OGNP20774 298 aaKnown RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 LPOP22079 712 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 MZF1P28698 734 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 RECQLP46063 649 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 GRIA4P48058 902 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ARCN1P48444 511 aaKnown RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 SERPINB4P48594 390 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ARF5P84085 180 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 USP10Q14694 798 aaKnown RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 EML3Q32P44 896 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 PLEKHG6Q3KR16 790 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 SLC44A4Q53GD3 710 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 FASTKD1Q53R41 847 aaKnown RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 RNF43Q68DV7 783 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 KLC3Q6P597 504 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 NCEH1Q6PIU2 408 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 SPATA21Q7Z572 469 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 PIGWQ7Z7B1 504 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ZC3HC1Q86WB0 502 aaKnown RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ADGRG2Q8IZP9 1017 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 GPR150Q8NGU9 434 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 RDH11Q8TC12 318 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ZNF398Q8TD17 642 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 WBP2Q969T9 261 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 TUBGCP5Q96RT8 1024 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 TCF12Q99081 682 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 PRRX2Q99811 253 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 TRIM56Q9BRZ2 755 aaKnown RBP10.29□□□□□ -0.76
HDAC3-214ENST00000495485 BBS2Q9BXC9 721 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 CEP44Q9C0F1 390 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 RABEP2Q9H5N1 569 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ATP13A3Q9H7F0 1226 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ECT2Q9H8V3 914 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 UGT1A7Q9HAW7 530 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 UGT1A10Q9HAW8 530 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 UGT1A8Q9HAW9 530 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 SNX15Q9NRS6 342 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 FGFR1OP2Q9NVK5 253 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 PHTF1Q9UMS5 762 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 CHKBQ9Y259 395 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ARL2BPQ9Y2Y0 163 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 ACOT9Q9Y305 439 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 PKP3Q9Y446 797 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 OR51B4Q9Y5P0 310 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 RAI2Q9Y5P3 530 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 COL4A2P08572 1712 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 CACNA1IQ9P0X4 2223 aa10.29□□□□□ -0.76
HDAC3-214ENST00000495485 A0A096LPK6 155 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 PRR33A8MZF0 331 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 MUSKO15146 869 aa10.28□□□□□ -0.76
HDAC3-214ENST00000495485 STX7O15400 261 aaKnown RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 HOXC11O43248 304 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-214ENST00000495485 SNX3O60493 162 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms