RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CYP1A2P05177 515 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 ACTN2P35609 894 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 LSSP48449 732 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 KIAA1024LP59773 190 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 AP1S1P61966 158 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 NSUN2Q08J23 767 aaKnown RBP eCLIP11.68□□□□□ -0.54
VTI1A-208ENST00000494728 ZNF235Q14590 738 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 ATP13A4Q4VNC1 1196 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 TMCO3Q6UWJ1 677 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 RBM44Q6ZP01 1051 aaKnown RBP11.68□□□□□ -0.54
VTI1A-208ENST00000494728 TSPAN33Q86UF1 283 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 FSTL5Q8N475 847 aaPredicted RBP11.68□□□□□ -0.54
VTI1A-208ENST00000494728 ARL10Q8N8L6 244 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 PDCD6IPQ8WUM4 868 aaKnown RBP11.68□□□□□ -0.54
VTI1A-208ENST00000494728 LRRN4Q8WUT4 740 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 CPLX3Q8WVH0 158 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 SPOCK2Q92563 424 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 TRIM11Q96F44 468 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 COQ10AQ96MF6 247 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 ZNF599Q96NL3 588 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 MGME1Q9BQP7 344 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.68□□□□□ -0.54
VTI1A-208ENST00000494728 PACSIN1Q9BY11 444 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 ABCG4Q9H172 646 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 SYNDIG1Q9H7V2 258 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 NOD2Q9HC29 1040 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 MRPL47Q9HD33 250 aaKnown RBP11.68□□□□□ -0.54
VTI1A-208ENST00000494728 DONSONQ9NYP3 566 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 GULP1Q9UBP9 304 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 PADI4Q9UM07 663 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 ST14Q9Y5Y6 855 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 SDK2Q58EX2 2172 aa11.68□□□□□ -0.54
VTI1A-208ENST00000494728 A0A1W2PQM1 296 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 CFAP69A5D8W1 941 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 NPIPB15A6NHN6 443 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-208ENST00000494728 NTN3O00634 580 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-208ENST00000494728 NOBOXO60393 691 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 C1QL1O75973 258 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 CPP00450 1065 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 FUCA1P04066 466 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 GJC1P36383 396 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 ARL4AP40617 200 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 ETV3P41162 512 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 ARSEP51690 589 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 ZNF135P52742 658 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-208ENST00000494728 PCBP4P57723 403 aaKnown RBP11.67□□□□□ -0.54
VTI1A-208ENST00000494728 TAS2R40P59535 323 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 SKOR1P84550 965 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 ACOX1Q15067 660 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 ELOCQ15369 112 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 NCBP2-AS2Q69YL0 99 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 ESRP1Q6NXG1 681 aaKnown RBP11.67□□□□□ -0.54
VTI1A-208ENST00000494728 LRRC69Q6ZNQ3 347 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 RFLNAQ6ZTI6 216 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 TMPRSS9Q7Z410 1059 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 HSD11B1LQ7Z5J1 315 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 SDR16C5Q8N3Y7 309 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 ATPAF2Q8N5M1 289 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 LZTR1Q8N653 840 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 GPR156Q8NFN8 814 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 FAM71BQ8TC56 605 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 TEKT4Q8WW24 435 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 SYN2Q92777 582 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-208ENST00000494728 NAT6Q93015 286 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 ZNF578Q96N58 590 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-208ENST00000494728 NUDCD1Q96RS6 583 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 LGMNQ99538 433 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 TMEM168Q9H0V1 697 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 CPNE5Q9HCH3 593 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 EVA1BQ9NVM1 165 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 NCKIPSDQ9NZQ3 722 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 IFNKQ9P0W0 207 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 CAPN11Q9UMQ6 739 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 GPR34Q9UPC5 381 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 DGKBQ9Y6T7 804 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 SPTA1P02549 2419 aa11.67□□□□□ -0.54
VTI1A-208ENST00000494728 D6RAR5 112 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 RRP8O43159 456 aaKnown RBP11.66□□□□□ -0.54
VTI1A-208ENST00000494728 SOCS5O75159 536 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 TCEA3O75764 348 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 HEXIM1O94992 359 aaKnown RBP11.66□□□□□ -0.54
VTI1A-208ENST00000494728 SERPING1P05155 500 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 PDHA1P08559 390 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 ALPIP09923 528 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 CTSEP14091 401 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 CTPS1P17812 591 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 HTR1BP28222 390 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 CASP14P31944 242 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 VIPR1P32241 457 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 TRIM23P36406 574 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 BLKP51451 505 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 CDH6P55285 790 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 UBASH3AP57075 661 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 CCL7P80098 99 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 ZBED6P86452 979 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 DPYSL3Q14195 570 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 PIGHQ14442 188 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-208ENST00000494728 ACAP1Q15027 740 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 BOLA3Q53S33 107 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 DENND2CQ68D51 928 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms